Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03318 ATGCTTAATCTTATTGGTTTCTCGTTGTTGACTATGGATTCGGTGCCTTATAGGGGATTGTTTCAGACATTCTTCATACTCAATTATGTTTTGCTTTGCCAACTTGTCATTATTCAACCCTTTGTTTCTGCTTCAGGAAATGCAGCTGAGTTGTTTGAGAAAGCATCTCGAAGTATAAAAGGGAAACATTATACTGAGGCACTTAATGATCTAAATGCTGCAATAGAAGCAGATCCAAACCTTTCAGAAGCATACCTTTCCCAGGCTTCAGTTCTTCGCAAGTTATGCAGATATGAGCAATCTGAGAGGAGCTACAAAAAGTTTCTGGAGTTAAAACCCGGACATTCAATTGCAGAAAAGGAGCTCTCTCAGCTATTGCAGGCTCAAAGTGCGCTCCAAACAGCTCAGTCCCTCTATGAGTCAGCCAACTTCACAAAATCTTTGGAATACATTGATAAAGTTGTTCTTGTTTTCTCTCCAGCATGCACTAAGGCTAAGCTTCTTAAAGTGAGGTTGTTGATAGCTGATAAAGAGTATGAGGGTGCCATTGCTGAGTCTGGTTTTCTTCTCAAGGAAGATGAAAACAATTTAGAGGCATTGTTGTTACGTGGTCGTGCATATTACTATTTAGCTGATCATGATGTTGCTACAAGGCATTACCAGAAAGGTCTTCGCCTAGATCCTGAGCATAGTGAACTGAAAAAAGCATACTTTGGACTGAAAAATCTACTCAAAAAGAGTAAAAGTGCTGAAGATAATGCGAGTAAGGGCAAGCTACGGGTGGCAGTCGAGGAATTCAAGGCTGCACTTGCTGTCGACCCTGACCATCTTGCACATAATGTACATCTTCATCTTGGCCTGTGTAAAGTGCTAGTCAGGCTTGGCAGAGGAAAGGACGCCTTGAACAGTTGTAGTGAAGCTCTTAAGATCGATGAGGAACTTATTGATGCTCTTGTTCAGAGGGGAGAAGCTAAACTCTTGACGGAAGACTGGGAGGGAGCTGTTGAAGATCTGAAATCAGCTGCTCAAAAATCTCCTCAGGATATGAATATTCGTGAAGCATTAATGAGGGCTGAAAAGGCTTTAAAGATCAGCAAACGCAAGGATTATTACAAGATTTTGGAAATTTCAAAACATGCTTCCGCTGCTGAGATAAAACGTGCATACAAGAAACTTGCCTTACAATGGCACCCGGATAAGAATGTTGACAAAAGGGAAGAAGCAGAGGCTAAATTCCGAGAAATCGCTGCTGCATACGAGGTTCTAAGTGATGAAGACAAACGCACAAGATACGACCAAGGGGAGGACCTTGAAGAATCGGGAATGGGTGGCGGCGGCGGTGGAGGTTTCAATCCATTCGGCGGTGGTGGACAGCAATTTCACTTTACTTTTGACGGTGGCTTCCCCGGCGGAGGCTTTCCCGGTGGCGGCGGTGGTGGTTACGAATTTCATTTTTGA 1458 0.4328 MLNLIGFSLLTMDSVPYRGLFQTFFILNYVLLCQLVIIQPFVSASGNAAELFEKASRSIKGKHYTEALNDLNAAIEADPNLSEAYLSQASVLRKLCRYEQSERSYKKFLELKPGHSIAEKELSQLLQAQSALQTAQSLYESANFTKSLEYIDKVVLVFSPACTKAKLLKVRLLIADKEYEGAIAESGFLLKEDENNLEALLLRGRAYYYLADHDVATRHYQKGLRLDPEHSELKKAYFGLKNLLKKSKSAEDNASKGKLRVAVEEFKAALAVDPDHLAHNVHLHLGLCKVLVRLGRGKDALNSCSEALKIDEELIDALVQRGEAKLLTEDWEGAVEDLKSAAQKSPQDMNIREALMRAEKALKISKRKDYYKILEISKHASAAEIKRAYKKLALQWHPDKNVDKREEAEAKFREIAAAYEVLSDEDKRTRYDQGEDLEESGMGGGGGGGFNPFGGGGQQFHFTFDGGFPGGGFPGGGGGGYEFHF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03318 485 FunFam DnaJ subfamily C member 7 367 476 - -
Mepo3g03318 485 SUPERFAMILY TPR-like 63 364 IPR011990 GO:0005515
Mepo3g03318 485 ProSitePatterns Nt-dnaJ domain signature. 412 431 IPR018253 -
Mepo3g03318 485 Gene3D DnaJ domain 367 475 IPR036869 -
Mepo3g03318 485 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Mepo3g03318 485 Pfam Tetratricopeptide repeat 61 115 - -
Mepo3g03318 485 Pfam Tetratricopeptide repeat 198 230 IPR013105 -
Mepo3g03318 485 CDD DnaJ 369 424 IPR001623 -
Mepo3g03318 485 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 23 485 IPR044620 -
Mepo3g03318 485 SMART tpr_5 315 348 IPR019734 GO:0005515
Mepo3g03318 485 SMART tpr_5 82 115 IPR019734 GO:0005515
Mepo3g03318 485 SMART tpr_5 48 81 IPR019734 GO:0005515
Mepo3g03318 485 SMART tpr_5 197 230 IPR019734 GO:0005515
Mepo3g03318 485 SMART tpr_5 281 314 IPR019734 GO:0005515
Mepo3g03318 485 PRINTS DnaJ domain signature 407 427 IPR001623 -
Mepo3g03318 485 PRINTS DnaJ domain signature 371 389 IPR001623 -
Mepo3g03318 485 PRINTS DnaJ domain signature 427 446 IPR001623 -
Mepo3g03318 485 PRINTS DnaJ domain signature 389 404 IPR001623 -
Mepo3g03318 485 ProSiteProfiles TPR repeat profile. 82 115 IPR019734 GO:0005515
Mepo3g03318 485 Pfam DnaJ domain 369 432 IPR001623 -
Mepo3g03318 485 Coils Coil 405 425 - -
Mepo3g03318 485 SMART dnaj_3 368 427 IPR001623 -
Mepo3g03318 485 Gene3D Tetratricopeptide repeat domain 43 366 IPR011990 GO:0005515
Mepo3g03318 485 ProSiteProfiles dnaJ domain profile. 369 435 IPR001623 -
Mepo3g03318 485 FunFam DnaJ domain containing protein 38 366 - -
Mepo3g03318 485 SUPERFAMILY Chaperone J-domain 363 471 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03318 Mepo-Chr3 43209720 43215126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03318 365 432 C2H2 Transcription Factor Family AT1G74250 45.833 7.19e-10 59.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03318 3 43209720 43215126 Mepo3g03318 3 43209720 43215126 ECH