Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03313 ATGGACAAAAATCCTCACTCAGAAATTCAACTCCCTCCTGGATTTAGATTCCACCCTTCTGATGAAGAACTCATTGTTCACTATCTAAGAAACAAAGTGACTTCATCTCCTCTTCCTGCTTCATTCATAGCAGAAATAAATCTTTACAAGTACAATCCGTGGGAGCTTCCAAGTAAGGCTTTGTTTGGTGAGGAAGAATGGTATTTCTTTACTCCAAGGGACAGAAAGTATCCCAAAGGATTGAGGCCTAATAGAGCAGCTGGTGTAGGTTATTGGAAAGCAACTGGAACTGACAAACCTATTCTTACTTCATGTGGGTTGAAAAGCATTGGAGTGAAGAAAGCTCTTGTGTTCTATAAGGGACGTCCACCAAAAGGATCTAAAACCGAGTGGATCATGCATGAGTATAGGTTGCATGATTCGATGATCTCAAATTCCAATCATAGTGGCTCTATGAGACTGGATGAGTGGGTGCTATGTCGTGTTCGACAAAAAATGGGCAGCCCAAGAAGCAGTTGGGAAGATTCAAATGAACTTAGCTATGAATCAACTAGTCAATTTCAGCAAATGACTGTGAACTCTAATCCTGAACCAGTCAAAAACTATGTACAGAATGAATATCCAATGTTACCTTATATTTTGGCTTCTAAGAGTGCTCTGCCTAATTCCATCGGTATGACCTCAGACAATGTAAATATACAAGCTGCATCTTATGATGACAGCTTAAACGTGATAGGAGCACAGTTCTTATCAGCTACAACTGAGGGATTGTTTAATAAACCACTGAAGAGAAAAGCCGTCGAAGATAATGTTGCCATGGACTTTTATGATGTCCTCAATAAAAATTTAAGCAGAGAAGTTGATGGTAGGAAGCAAAGTCTTGAAAAAGATTTAAGCAAAGGATATAATTTCTACAGCTTTGATCAGTGGACTTCAATCATACAACCTCAAGAGCTTAATAGCTTAACCTTCACTGGATATACATAA 987 0.388 MDKNPHSEIQLPPGFRFHPSDEELIVHYLRNKVTSSPLPASFIAEINLYKYNPWELPSKALFGEEEWYFFTPRDRKYPKGLRPNRAAGVGYWKATGTDKPILTSCGLKSIGVKKALVFYKGRPPKGSKTEWIMHEYRLHDSMISNSNHSGSMRLDEWVLCRVRQKMGSPRSSWEDSNELSYESTSQFQQMTVNSNPEPVKNYVQNEYPMLPYILASKSALPNSIGMTSDNVNIQAASYDDSLNVIGAQFLSATTEGLFNKPLKRKAVEDNVAMDFYDVLNKNLSREVDGRKQSLEKDLSKGYNFYSFDQWTSIIQPQELNSLTFTGYT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03313 328 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Mepo3g03313 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 221 - -
Mepo3g03313 328 FunFam NAC domain-containing protein 72-like 20 170 - -
Mepo3g03313 328 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Mepo3g03313 328 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Mepo3g03313 328 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03313 Mepo-Chr3 43165293 43166918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03313 7 170 NAC Transcription Factor Family AT1G69490 66.463 9.16e-81 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g03313 NAM 3.8e-38 No_clan