Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03312 ATGAGCGTTATCGAAATTCTAACCCGAGTCGATACCATTTGTAAAAAATACGACAGATACGACGTCGTTAAACATAACGATATCAATGTCTCCGCCGCCGACGCATTCGCCAAACTCTATGCCGTCGTCAACGCCGACGTTGAGGCCGCGCTTCAGAAAGCAGAAACTGCTTCAAAGGAGAAAAACAGGGCTTCAGCTGTAGCTATCAATGCTGAAATTCGTCGTACTAAGGCTAGGTTACTGGAAGATATTCCCAAATTGCAGAGACTGGCTGTAAAAAAGGTAAAGGGGCTTTCGTCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTTCATTGCCTGAGAGAATCCAAGCAATCCCAGATGGCACTCCTGCTGCACCTAAACAGTCTGGAGGTTGGGGAGCTTCTGCCTCACGTCCTGAAATTAAATTTGATTCAGATGGCCGACTCAATGATGGATACTTTGAACCAACCAAAGAATCAAGTCAGTTTAGGCAGGAGTATGAAATGCGTAAAATGAAACAGGATGAAGGTTTGGATGTGATTGCAGAAGGATTGGATACTTTGAAAAACATGGCACACGATATGAACGAGGAATTTGATAGGCAAGTTCCACTGATGGATGAGATTGATAGTAAGGTAGACAAGGCATCTTCTGACCTTGAGAATACCAACGTTAGACTTAAAGACACAGTTACCCAGCTTCGATCCAGTCGAAACTTTTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATCGCCGCCTATTTGTACAATGTGCTAAAATGA 795 0.4277 MSVIEILTRVDTICKKYDRYDVVKHNDINVSAADAFAKLYAVVNADVEAALQKAETASKEKNRASAVAINAEIRRTKARLLEDIPKLQRLAVKKVKGLSSQEFAARNDLVLSLPERIQAIPDGTPAAPKQSGGWGASASRPEIKFDSDGRLNDGYFEPTKESSQFRQEYEMRKMKQDEGLDVIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDSKVDKASSDLENTNVRLKDTVTQLRSSRNFCIDIVLLIIILGIAAYLYNVLK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03312 264 Pfam SNARE domain 207 256 IPR000727 -
Mepo3g03312 264 FunFam Putative syntaxin-71-like 170 231 - -
Mepo3g03312 264 MobiDBLite consensus disorder prediction 122 142 - -
Mepo3g03312 264 Gene3D - 170 231 - -
Mepo3g03312 264 SMART tSNARE_6 165 232 IPR000727 -
Mepo3g03312 264 CDD SNARE_Qc 175 230 - -
Mepo3g03312 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Mepo3g03312 264 SUPERFAMILY SNARE fusion complex 162 230 - -
Mepo3g03312 264 Coils Coil 44 64 - -
Mepo3g03312 264 PANTHER SYNTAXIN 47 252 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03312 Mepo-Chr3 43160826 43164426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03312 1 264 SNARE and Associated Proteins AT3G09740 72.556 4.18e-146 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03312 K08506 - gmx:100819272 431.409