Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03311 ATGTTTTATAGCAACCGCTTTATTACATTGTCTCCTTCTTCAAACAAATCAAACAAACCCTTCACACTTTCTTCCTTCCGTTGCGTGTTCCAGATCGTTACTCAACCGCTTCCTCACCGATTCGTTGAATTATTTGCATTACACTATTTTTTACTATTTGGGGTTGCAAGTGCAATTATGGGGCATAGACACTTATTCAATGCATTTCCAATGTTTGAGGGTGAGGCTGACCCGAATTGGAATAATATGTTGACTGATCAACATCATGTGAACCATGGTGGGACCAGCTCTTCAGAAAATGGTTCTTTTATTTATCCTGTGGAAAATATGTCTATAGATAACATTTATTTCCCTTCTCATTGGAACGCCAACACAAGGTCAAATGGATATGCATCCTCAGGCCCCAATATTGAAGTACCACCTCCTCATCAATTGGACACATCGGGCACTTCTACTACTGATCATTTTATGCATTCGTCTAGTGCTGGACCTTTCTTTGCAGTGTCTGAAAACTTTGTACACCAGCCTTCTTCTTCCAATTATGACAGACAAGCATTTCATGTTGATAGTGGTTTTATTGATCTTACAATGGGGAGTGGACGAGCGCATCACAAGAGAAAGAGCCCTGGAATTCCTTCAGTCTATGAGAGAGGCAGTTCAAGTGGGTATTTCAATGCTGGGAGTTCAAGTGATCTTCCGATACCTCCAGAATCATGGCCAGAGAAACCAAATATGGATCCTCAATATATGCCTTGGGATCATGCTGCTATGGCACCCACATTCAGAGGTGCTGGTCTCTCAATGAAGGGTGAGAGTTCTGTAAGGAATGTTAGGAGCCGTTCTTCACTTGATTTGGAATCCAACCTGTGTAGGACCCATTTATCAAGTAGCCATTCACACAACTCGTATCCTACTGTCCCACCAGTCAGCCATTCTAGCTTGGCGGATCTTTCTCAGGTTTCCACCTCTCTGACAAGGGATTGGAGCCTAATGAACGTAACTTCTGCTAATGGAAGAGTGTTATTACCAGATGCTAGTACTTTTGGTCTTGAGACAAGTCACTTCCCTGTTGGAAATGCTGCTGCTGCTGCTGCTGCTAGTAATGCTACTGTAGATGTTGGAAGCTTCCATCATGAATTTGGCACAAGCAGATACCCTACTACTGCTCAAAGTTTTCAAAATTTGACTCAGACTGCTAGGGGAACTCGAAGTAATCACTCTCAGAGATCCAATCCAGCTTATAGGGCTTCTTCAAGCTTGCGCTTGGGTCAAGCGACACCTTCAGATAATGGGTTATCCATGGTAGCTGAAGGTTACTCTTCTAGACATCCAAGGCCATTGAACACTGTTGGCTGGCGGAACAGTGACAGAAATGGAAGGTCAAGAATTTCTAGTGAAAGATATAGATCACTGGCTGATCAGGCTGCTCTCCATGCAAGATTATCATCCTCTGAGGGTTTCATGATTGTTGAGCGTGCCTCACTATATGGTTCTAGGAATGTGCTTGATCAGCACAGAGAAATGAGAATGGACATTGATAACATGAGCTATGAGGAACTACTTGCACTTGGGGAGAGGATTGGCCAAGTGAACACAGGATTGTCTGAGGATGTTCTTTCCAAGTGTGTGACAGAAACAATATATTGTTCATCTGACCAATGTCAGGATGAAGGAAGCTGTGTGATCTGTCTGGAAGAGTACAAGAACATGGACGATGTTGGGACACTTAAAACTTGTGGACATGACTACCATGTAAGCTGCATCAGAAAGTGGTTATCTATGAAGAAACTATGTCCTATCTGCAAATCTTCTGCTTTGCCTGAGGATAAGAAGGATAAATAA 1842 0.4283 MFYSNRFITLSPSSNKSNKPFTLSSFRCVFQIVTQPLPHRFVELFALHYFLLFGVASAIMGHRHLFNAFPMFEGEADPNWNNMLTDQHHVNHGGTSSSENGSFIYPVENMSIDNIYFPSHWNANTRSNGYASSGPNIEVPPPHQLDTSGTSTTDHFMHSSSAGPFFAVSENFVHQPSSSNYDRQAFHVDSGFIDLTMGSGRAHHKRKSPGIPSVYERGSSSGYFNAGSSSDLPIPPESWPEKPNMDPQYMPWDHAAMAPTFRGAGLSMKGESSVRNVRSRSSLDLESNLCRTHLSSSHSHNSYPTVPPVSHSSLADLSQVSTSLTRDWSLMNVTSANGRVLLPDASTFGLETSHFPVGNAAAAAAASNATVDVGSFHHEFGTSRYPTTAQSFQNLTQTARGTRSNHSQRSNPAYRASSSLRLGQATPSDNGLSMVAEGYSSRHPRPLNTVGWRNSDRNGRSRISSERYRSLADQAALHARLSSSEGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSSDQCQDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIRKWLSMKKLCPICKSSALPEDKKDK 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03311 613 SUPERFAMILY RING/U-box 551 605 - -
Mepo3g03311 613 Pfam Ring finger domain 559 602 IPR001841 -
Mepo3g03311 613 SMART ring_2 560 601 IPR001841 -
Mepo3g03311 613 CDD RING-H2_RNF24-like 560 605 - -
Mepo3g03311 613 MobiDBLite consensus disorder prediction 397 433 - -
Mepo3g03311 613 ProSiteProfiles Zinc finger RING-type profile. 560 602 IPR001841 -
Mepo3g03311 613 FunFam E3 ubiquitin-protein ligase MBR2 isoform A 525 606 - -
Mepo3g03311 613 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 525 606 IPR013083 -
Mepo3g03311 613 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 157 606 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03311 Mepo-Chr3 43140980 43148677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03311 60 612 C3H Transcription Factor Family AT2G37150 39.821 4.32e-105 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03311 - - tpra:123892936 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03311 3 43140980 43148677 Mepo3g03311 3 43140980 43148677 ECH