Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03302 ATGGGGAAGAAGGGAAATTGGTTTTCTACAGTGAAGAAAGCTCTCAGCCCTGACTCAAAGAAATCAAGTAAATCAAAAAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGACCCCTCTGTAGAAATCGATACAGCACCGCCTCTTCCTCCGCCAGAAGATATTAAATTAACTGATATTGAAAATCAAAGCAATCACCATCATGTTGCTGAAATTACAACTGTGGTGGATGTCGAGGAACCTGTTCATTCTGTTCAGACAGCGGTTGTTAAGACTCAAGCTGCTGCAGTTTCTCGTTTTGCTGGTAAACCAAAGGATGAAGTAGCAGCAATCAAGATTCAAACAGCTTTTCGGGGTTACTTGGCAAGAAGAGCATTGCGGGCTTTGAGAGGGCTGGTCAGATTGAAAACATTAATGGAAGGGCCGGCTGTAAAACGCCAAGCCATGAGTACCCTCCGCTCAATGCAGACGTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGGTCAGAATGTTAGAGGAGAATCAGGCTTTGCAGAGACAGCTCTTACAGAAGCATGCAAGGGAGCTTGAAACCATGCGGATTGGGGAGGAATGGGACGATAGCCTACAATCAAAAGAACAAATTGAAGCCAAATTACTGAGCAAGTATGAGGCTACTATGCGAAGAGAAAGAGCACTGGCTTATGCATTCACTCATCAGCAAAACTCGAAGAACTCGTCTAGATCTATGAATCCAATGTTTGTGGATCCAACCAATCCTACTTGGGGGTGGAGCTGGATAGAACGATGGATGGCTGCCCGACCTTGGGAGAGCCGTGGCCTTGTTGATAAAGAACTGAATGATCATTCATCTGTTAAAAGTTCGAGCCGCAGCATCATAGGTGGAGAAATCAGCAAATCATTTGCCCGTTTCCAGCTCAACTCTGAAATACATTCTCCAGTCGCGAGCCAAAATCCTGGCTCCCCCAGCTTTCAGTCCAATTCAACTCCTACTAAGCCGGGGTCTGCTTCAGTTGCCAGGAAACTGAAGAAGGCGAGTCCAAAGGGAAGCTGGGTTATGGATGATGACTCCAAAAGCATGGCAAGTGTACAGTCAGATCGGTTCCGCAGGCACTCTATTGCCGGGTCATCAGTTAGAGATGATGAGAGTCTTGCTAGCTCTCCATCTGTTCCAAGTTATATGGTGCCGACTCAATCTGCGAAAGCTAGGTTAAGGACACAAAGTCAAAGTCCATTAGCAAAAGAAAATGGCAAACAAGAAAAGGGGTCCTTTGGAACTGCAAAGAAGCGTCTTTCTTTCCCAGCTTCGCCTACGAGGCCAAGGCGTCATTCAGGTCCACCGAAGGTAGAAACCGCCATAAATGCAGAGTTACCTGTGAACAATGGTGTAGCCAGTTGA 1407 0.4613 MGKKGNWFSTVKKALSPDSKKSSKSKKKWFGKQKLQTSDPSVEIDTAPPLPPPEDIKLTDIENQSNHHHVAEITTVVDVEEPVHSVQTAVVKTQAAAVSRFAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKTLMEGPAVKRQAMSTLRSMQTLARVQSQIRSRRVRMLEENQALQRQLLQKHARELETMRIGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNSKNSSRSMNPMFVDPTNPTWGWSWIERWMAARPWESRGLVDKELNDHSSVKSSSRSIIGGEISKSFARFQLNSEIHSPVASQNPGSPSFQSNSTPTKPGSASVARKLKKASPKGSWVMDDDSKSMASVQSDRFRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKARLRTQSQSPLAKENGKQEKGSFGTAKKRLSFPASPTRPRRHSGPPKVETAINAELPVNNGVAS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03302 468 MobiDBLite consensus disorder prediction 1 53 - -
Mepo3g03302 468 MobiDBLite consensus disorder prediction 315 468 - -
Mepo3g03302 468 Gene3D - 66 133 - -
Mepo3g03302 468 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Mepo3g03302 468 Pfam IQ calmodulin-binding motif 110 128 IPR000048 GO:0005515
Mepo3g03302 468 SMART iq_5 106 128 IPR000048 GO:0005515
Mepo3g03302 468 PANTHER IQ-DOMAIN 5-RELATED 1 439 - -
Mepo3g03302 468 Pfam Protein of unknown function (DUF4005) 380 447 IPR025064 -
Mepo3g03302 468 MobiDBLite consensus disorder prediction 315 338 - -
Mepo3g03302 468 MobiDBLite consensus disorder prediction 382 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03302 Mepo-Chr3 43058561 43062493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03302 1 468 IQD Protein Family AT5G03040 52.245 1.05e-146 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03302 - - gmx:100800080 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03302 3 43058561 43062493 Mepo3g03302 3 43058561 43062493 ECH
Mepo3g03302 3 43058561 43062493 Mepo4g02609 4 34765142 34769177 PCT