Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03289 ATGTTGGATCTCAATCTCAACGCTGATTCCTCTCTTCCACTCTCCTCCGTCGTTCAGATGGAAAGCTCCGGTAGCTTTGATTCCTCCGTCGTCAACGCTGCCGACACTGAAGATTCATGCTCTTACGGCGATGCATACGGTTACAACTTCGCCATCCTCAACAACAACGCTTCCTTCGACAACGGTACTATCTCCGGTGAGCTTCAACACTCCGGCGCCGGCGAAGCAGGTGTACGGACAATTCAGCTTTTTCCAGCAAACGAATCGGGAATGATCTCGCCTTCTGAGAGTAGAGGATGGATGAATTTCTCGTCCGATCATCATGGTGGCGTACCGGAGCAGACTGTTGTTGTTGCTCCACGACCTCAGCAGGTGAAGAAGAGTCGTCGTGGACCGAGGTCACGAAGCTCGCAGTATCGTGGTGTTACTTTCTACCGGAGAACTGGACGTTGGGAATCGCATATTTGGGATTGTGGAAAACAAGTATACTTAGGTGGATTTGATACCGCGCATGCTGCGGCAAGAGCATATGATCGAGCTGCGATAAAGTTTCGTGGCGTGGATGCGGATATTAATTTCAATGTCAGTGATTATGATGAAGATATAAAGCAGATGAATAACTTTACAAAGGAAGAGTTTGTGCATATTCTGCGTAGACAGAGTACTGGCTTCTCAAGGGGAAGTTCTAAATACAGAGGAGTTACTCTGCATAAATGTGGACGATGGGAAGCTCGTATGGGACAGTTTCTTGGGAAGAAGTATATATATCTTGGGCTTTTTGATAGCGAGCTAGATGCTGCAAGAGCGTATGATAAGGCTGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAATTTTGAGGCTAGTTCTTATGAAGGAGAGTTAACTTCCCAGGCTGATAACGATGATATCAAGCAGAATCTTGATCTGAACTTGGGTATAGCTCCTCCTTCTAACTCTGATGTTGAAATGATGAACATGCACCACAATGGAAGTGGTTTGCAAGTTCAGCGTAACTGGGATGATATGCCTGTTGATAAGAGTGTAATGTTTGAGGACTCTGGGTCAAGATCACTCAATGTTCAGTCATCTTATGGCTTTCCCATAGCATCTGAGCATCAACCTCCAGTCTGGAGTGGTACTAATTACTTTCCCGTGTGTAAGGAAAGAGCAATAGAGAATAGGATGGAATCTGCTCCCGTTCCAAATTGGGCATGGCAGCTCCAAAGTCCATATAATAATGGGTCAACTTTGATTCCACCTAATTTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACAACAGCTGCGGATAGTCAAATTCATTTTCCAAACATAACATACCTCCACCCTCATTTTCCTACTCCAGTGACTAACTCCAGCCACATACCCTCTTTCTACTGCAGGAGCTGA 1413 0.4551 MLDLNLNADSSLPLSSVVQMESSGSFDSSVVNAADTEDSCSYGDAYGYNFAILNNNASFDNGTISGELQHSGAGEAGVRTIQLFPANESGMISPSESRGWMNFSSDHHGGVPEQTVVVAPRPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMNNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELDAARAYDKAAIKCNGREAVTNFEASSYEGELTSQADNDDIKQNLDLNLGIAPPSNSDVEMMNMHHNGSGLQVQRNWDDMPVDKSVMFEDSGSRSLNVQSSYGFPIASEHQPPVWSGTNYFPVCKERAIENRMESAPVPNWAWQLQSPYNNGSTLIPPNFSAAASSGFPSTTAADSQIHFPNITYLHPHFPTPVTNSSHIPSFYCRS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03289 470 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 105 319 - -
Mepo3g03289 470 SMART rav1_2 138 200 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 SMART rav1_2 230 293 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 PRINTS Ethylene responsive element binding protein signature 269 289 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 PRINTS Ethylene responsive element binding protein signature 231 242 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 SUPERFAMILY DNA-binding domain 137 196 IPR016177 GO:0003677
Mepo3g03289 470 Pfam AP2 domain 229 279 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 Pfam AP2 domain 138 186 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 ProSiteProfiles AP2/ERF domain profile. 230 287 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 CDD AP2 138 196 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 SUPERFAMILY DNA-binding domain 229 288 IPR016177 GO:0003677
Mepo3g03289 470 Gene3D AP2/ERF domain 137 196 IPR036955 GO:0003700|GO:0006355
Mepo3g03289 470 Gene3D AP2/ERF domain 229 288 IPR036955 GO:0003700|GO:0006355
Mepo3g03289 470 CDD AP2 229 289 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 ProSiteProfiles AP2/ERF domain profile. 138 194 IPR001471 GO:0003700|GO:0006355
Mepo3g03289 470 FunFam AP2-like ethylene-responsive transcription factor 137 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03289 Mepo-Chr3 42939724 42942766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03289 116 368 AP2-EREBP Transcription Factor Family AT4G36920 66.016 5.86e-96 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo3g03289 AP2 1.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03289 K09284 - gmx:100797238 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03289 3 42939724 42942766 Mepo3g03289 3 42939724 42942766 ECH