Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03283 ATGATGGATATTGAAGAAGCAGAAAGAGTAGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCTTCTTACAAATCTTTCTCAGAGCTTCTAGCAGGTGCAATCAATTCCACTCCTCCAATTGCATCTTCTCAAACTACAATATCCGCCATTAGGCCAAAGACAGTGAGGTTCAAGCCAGCAATGAATATCCCCCCTTCTCAGGCTAATATTTTTGGAGGTGCACTTAGCAGCTCTTCTGACATGGATCCCAAACCTGACGCCAATCAATCTCTCATTTACAAACCAATGGCAAAATTTGTGTCACAGACAACTGTCTCTCTCCTGGCAAACATGATGTTTAGGCATGCAGAATTTACGCTCCAGATGTTGCGTTTTAGACGTGAGCATATTGTATCAGAGGAAGGTTTAGTAGAGCCAGGCATTGTGATGCAAAGTTCTGTGGATTCTGAAGTCCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAACCCATATCCCAGAAGTTACTATAGATGTACTAGTATCAACTGCAACGTTCGCAAGCATGTGGAGAGATCAATAGATGATCCAAAATCATTTGTGACTACATATGAAGGAAAACACAACCATGAGATGCCACTCAAGAACACAACAAATATGACCTCTGAAAAAATTCAATGA 684 0.4211 MMDIEEAERVVVAKPVASRPTCSSYKSFSELLAGAINSTPPIASSQTTISAIRPKTVRFKPAMNIPPSQANIFGGALSSSSDMDPKPDANQSLIYKPMAKFVSQTTVSLLANMMFRHAEFTLQMLRFRREHIVSEEGLVEPGIVMQSSVDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTSINCNVRKHVERSIDDPKSFVTTYEGKHNHEMPLKNTTNMTSEKIQ 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03283 227 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 129 218 IPR044810 GO:0003700
Mepo3g03283 227 SUPERFAMILY WRKY DNA-binding domain 148 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g03283 227 FunFam WRKY transcription factor 57 140 214 - -
Mepo3g03283 227 Coils Coil 225 227 - -
Mepo3g03283 227 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03283 227 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g03283 227 Gene3D WRKY domain 140 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g03283 227 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03283 Mepo-Chr3 42887817 42890936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03283 133 214 WRKY Transcription Factor Family AT1G13960 63.415 4.30e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g03283 WRKY 5.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03283 - - gmx:100127379 228.024