Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03282 ATGGGTTGGATTCCATGTTCTGGAAATTCAGGAACTAAGAAGAAGATTGTGAAGATGGAAGTTCAAGATAGTGTTGCTCCTCAGATTAAAGCTACCCCAGGGAAGTTGAAGAGGAATTCATCAACAAATTCCAAAGATACATCTAAAAATGGGAGCACTGAACACATTGCAGCACAAACTTTCTCATTCCGCGAATTAGCAACTGCAACTAGAAATTTTAGAGCAGAATGTCTTTTGGGGGAGGGAGGCTTTGGTAGAGTATACAAAGGGCATTTGGAAAGTATTAATCAGGTTGTCGCCATCAAGCAACTTGACCGAAACGGACTCCAAGGGAACAGGGAATTCCTTGTTGAAGTATTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGTTATTGCGCCGATGGAGATCAAAGGCTTTTAGTTTATGAATATATGCCATTAGGATGCTTGGAAGATCACTTGCATGATATTTCTCCTGCCAAGAAACGGCTTGACTGGAACACACGAATGAAAATAGCTGCGGGGGCAGCAAAGGGGTTGGAATATCTACACGACAAAGCTAATCCTCCGGTCATATACCGAGATTTGAAGTGCTCCAACATTTTGCTTGGTGAAGGGTATCACCCAAAGTTATCTGATTTTGGTTTGGCCAAACTAGGCCCGGTCGGAGAAAACACCCATGTATCGACAAGAGTTATGGGAACCTATGGATATTGTGCTCCAGAGTATGCGATGACTGGTCAACTCACTCTAAAATCAGATGTTTATAGCTTTGGCGTAGTTCTTCTCGAAATAATTACAGGAAGGAAAGCAATTGACTATTCGAAATCCGCAGCAGAACAGAATCTTGTCGCATGGGCTAGACCGTTGTTCAAAGATCGAAGGAAATTTTCACAAATGGCCGATCCTATGCTTCAAGGGCAGTATCCTTCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAACAAGCTAATATGCGTCCGGTTATAGCTGATGTTGTCACGGCTTTGTCTTACCTTGCATTGCAAAAACACGATCCCAATGCAGTTCAAAACTCTCGCCTCGCTCCTAGTACTCCTACTAGAACCAGGAGGGGGCGATGA 1134 0.4365 MGWIPCSGNSGTKKKIVKMEVQDSVAPQIKATPGKLKRNSSTNSKDTSKNGSTEHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGHLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGCLEDHLHDISPAKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDYSKSAAEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLALQKHDPNAVQNSRLAPSTPTRTRRGR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03282 377 FunFam Serine/threonine-protein kinase PBS1 150 365 - -
Mepo3g03282 377 FunFam Serine/threonine-protein kinase PBS1 45 149 - -
Mepo3g03282 377 Pfam Protein tyrosine and serine/threonine kinase 77 346 IPR001245 GO:0004672|GO:0006468
Mepo3g03282 377 SUPERFAMILY Protein kinase-like (PK-like) 59 360 IPR011009 -
Mepo3g03282 377 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Mepo3g03282 377 PANTHER OS07G0668900 PROTEIN 35 358 - -
Mepo3g03282 377 MobiDBLite consensus disorder prediction 28 52 - -
Mepo3g03282 377 CDD STKc_IRAK 79 347 - -
Mepo3g03282 377 Gene3D Phosphorylase Kinase; domain 1 42 149 - -
Mepo3g03282 377 ProSiteProfiles Protein kinase domain profile. 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03282 377 Gene3D Transferase(Phosphotransferase) domain 1 150 367 - -
Mepo3g03282 377 SMART serkin_6 73 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03282 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Mepo3g03282 377 MobiDBLite consensus disorder prediction 34 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03282 Mepo-Chr3 42881846 42885110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03282 30 350 Glycoside Hydrolase AT3G07070 68.224 1.12e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo3g03282 PK_Tyr_Ser-Thr 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03282 - - gmx:100818024 693.345