Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03240 ATGGCATTTTTCTCTGGATTTCAGCGCTTGCTTCGCCACTCTCAATCCCCACTTGTTGTTAGCTCCCATTTCACTTCCATTCGTCTCAATTCATCTCTCACTTCCCCCAAACTTTTCATCAGCGGTCTTTCAAGACTGACAACAAATGAAAAACTTACAGAAGCATTTTCTCCTTTTGGACAGCTGGTGGAAGCTAAGGTGATAACTGATAGAGGCTCTGGAAGATCGAAGGGTTTTGCTTTTGTATCTTATTCAACCATAGAAGAAGCTGAGAAGGCAAGAGAAGGAATGAATGCTAAATTTTTGGATGGTTGGGTTATATTTGTTGATCCTGCCAAACCAAGAGAACCCAGACCTCCTCAGCAATCACAATCTCAGCCGTCTCAAACAGGCTTCACCGTAAATAAGACCGTTGGGTGGTGTGGTTGA 429 0.4336 MAFFSGFQRLLRHSQSPLVVSSHFTSIRLNSSLTSPKLFISGLSRLTTNEKLTEAFSPFGQLVEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSQTGFTVNKTVGWCG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03240 142 PANTHER NUCLEOLAR PROTEIN 8 26 141 - -
Mepo3g03240 142 MobiDBLite consensus disorder prediction 122 136 - -
Mepo3g03240 142 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 104 IPR000504 GO:0003723
Mepo3g03240 142 Gene3D - 27 136 IPR012677 -
Mepo3g03240 142 SUPERFAMILY RNA-binding domain, RBD 35 136 IPR035979 GO:0003676
Mepo3g03240 142 FunFam RNA binding protein 23 136 - -
Mepo3g03240 142 SMART rrm1_1 37 110 IPR000504 GO:0003723
Mepo3g03240 142 MobiDBLite consensus disorder prediction 112 142 - -
Mepo3g03240 142 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03240 Mepo-Chr3 42572399 42574971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03240 38 129 Eukaryotic Initiation Factors Gene Family AT3G16380 38.947 1.12e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03240 3 42572399 42574971 Mepo3g03240 3 42572399 42574971 ECH