Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03219 ATGGCATCACCTCAAAACTTTGTATTATCCAAGTTAACAGCACTGGTTGTGGATGACAATATAATAAACAGAAAGATTCATCAAAAGATGTTGAATAAATTTGGAGTCAAAAGTCAAGGTGTGGAGAATGGAAAAGAAGCAGTGGACATTCATTGGCGTGGGCAAAAATTTGACCTAATTCTCATGGACATGGATATGCCTATCATGAATGGCATTGAGGCAACAAAGGAACTTCGTGCAATGGGTATTTGTAGCACAATTGTTGGTGTGTCATCACGCTCTATGGAAGATGAAATACTAAAATTCAAGGAAGCTGGATTGGATGAATATCAAGAGAAACCCTTGAACAATGCAATACTTAGTTCCATTCTTGGCAAGATCAATCCAACTGTGTGA 396 0.3788 MASPQNFVLSKLTALVVDDNIINRKIHQKMLNKFGVKSQGVENGKEAVDIHWRGQKFDLILMDMDMPIMNGIEATKELRAMGICSTIVGVSSRSMEDEILKFKEAGLDEYQEKPLNNAILSSILGKINPTV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03219 131 CDD REC_hyHK_CKI1_RcsC-like 15 124 - -
Mepo3g03219 131 Pfam Response regulator receiver domain 15 120 IPR001789 GO:0000160
Mepo3g03219 131 Gene3D - 2 128 - -
Mepo3g03219 131 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Mepo3g03219 131 SMART REC_2 12 124 IPR001789 GO:0000160
Mepo3g03219 131 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 127 - -
Mepo3g03219 131 SUPERFAMILY CheY-like 10 126 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03219 Mepo-Chr3 42337294 42338788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03219 12 118 Response Regulator Gene Family AT3G04280 45.872 1.76e-25 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g03219 Response_reg 3.6e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03219 - - gmx:100794931 175.252