Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03210 ATGGCTGCTGCTGCCAATCCCATTGTTGGGACCCATGTTTGGATTGAGGATTCTGATATAGCTTGGATAGATGGTGAGGTCGTGGGGGCCAATGGAGAGGAAATCAAAGTCCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCCAAAATTTATCATAAAGATACTGAAGTTCCACCAAGTGGAGTGGATGATATGACAAAGCTCGCGTACCTGCACGAACCTGGAGTCCTAAATAATCTGAGATCGAGATATGATATCAACGAAATTTATACTTACACTGGGAATATACTGATTGCTGTGAACCCTTTCATAAAGCTTCCTCATTTATATGATAGTCATATGATGGCACAATATAAAGGAGTAGCTTTCGGTGAGTTAAGTCCACACCCCTTTGCTGTTGCAGATGCAGCGTACAGGTTCATGATAAACGAGGGAATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGAGCAGGTAAAACAGAAACTACTAAGTTACTCATGCGATATCTTGCTTACATGGGTGGGAGAGCTGCAGTTGCTGAAGGTAGAACTGTTGAGCAAAAAGTCCTTGAGTCAAATCCTGTCCTAGAAGCCTTTGGCAATGCAAAGACTGTCAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGATCAAAAAGGAAGAATTTCGGGTGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGCCAGCTGTCAGATCCTGAGAGGAATTATCATTGTTTCTACATGCTCTGTGCTGCACCTGCAGAGGTTGTTAAGAAGTACAAATTAGGACATCCAAGAACATTTCATTATCTGAATCAATCAAATTGCTACGAGTTGGAAGGGCTTGATGAAGCTAAAGAATATATCGCAATAAGGAGAGCAATGGATGTTGTTGGAATAAGTATTGAGGATCAGGATGCAATATTTCAAGTTGTGGCTGCTATTTTGCATCTCGGGAACATTGAATTTGTGAAAGGGGAGGAGATAGATTCGTCTATGCCCAAAGATGAAAAGTCCCTGTTCCACCTACAGACTGCAGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGCGATGAAACAATAACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGTCGAGATGCTTTGGCTAAGATTGTTTACACAAGATTGTTTGACTGGTTAGTTGATACCATAAATAATTCCATTGGTCAAGATCCTGAGTCAAAATCCTTAATTGGCGTGCTGGATATTTACGGTTTTGAGAGTTTCAAGAATAACAGTTTTGAGCAATTCTGTATTAATTTGACAAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAAGAAATTGATTGGAGTTACATTGAATTTGTGGATAATCAAGATATTCTGGATCTGATTGAAAAGAAACCTGGTGGCATTATTTCGCTTTTGGACGAAGCATGTATGTTTCCTAGATCAACTCATGAAACTTTTTCCCAAAAGCTGTATCAGACCTTCAAAGACCATAAAAGGTTTAGCAAGCCCAAATTATCACCTAGTGACTTCACAATTTGCCATTATGCTGGCGATGTTACTTATCAAACTGAATTCTTCCTTGACAAGAACAAAGATTATGTTGTTGCAGAACACCAGTCACTTCTTTATGCTTCCACATGTCCCTTTGTATCAGGCTTGTTTCCTCCTTCACCTGAGGAAACTTCCAAACAATCAAAGTTCTCTTCAATAGGTTCCAGATTTAAGCAACAATTGCAATCTTTACTTGAAACTCTAAGCTCCACTGAACCACACTATATTCGATGTGTGAAACCCAATAATCTTCTTAAGCCGGCAATTTTTGAGAATAAAAATGTTTTGCTGCAACTGCGCTGTGGGGGAGTTATGGAGGCAATCAGGATTAGCTGTGCTGGTTATCCCACTAGAAAAGCCTTTGATGAATTTATCGATCGATTTGGCCTTCTTGCTCCTGAAGTATTAGATGGAAGTTCTGATGAGGTCACTGCATGCAAGAGGATCCTAAAGAATGTTCGGCTTGAAGGTTATCAGATTGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGAACTAGATACCCGTAGAAGTGAGATTTTGGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTTCGTTCCTACTTGGCACATCAAAGTTTCATTTCGCTTCGTTTGTCAGCTTTGCAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTTTGAGGGATTGCGGCGGGAGGCTTCTAGTCTGCTCATTCAAAGGTGTTTCCGGATGCATATTGCTAAGAAGGCGTACAAAGAATTGTATGCCTCTGCTGTCTCTATCCAGACTGGTATGCGGGTGATGGCTGCTCAGTGTGAGCTTTACTCTAGAAGGAGGACTAGCGCAGCAATTATCATTCAGAGCCACTGCAGGAAATACTTGGCACTACATAACTTCATGAAATTAAAGAAGGCAGCAATTGCAACACAATGTGCATGGAGAGGAAAAGTTGCCCGGCGACAACTGCGGAAACTCAAGATGGCTGCAAAAGAAACAGGGGCTCTCCAAGATGCCAAAAATAAGCTTGAAAAACAAGTTGAAGACCTTACATTAAGATTGCAGCTGGAAAAACGTATAAGGTTGGACGTTGAAGAAGCAAAAGCAAAAGAAAACAAAAGATTACAGTCAGCTTTGCAAGAGATGCAACTTCAATTCAAAGAAACTAAAGTACTTCTCGAAAAGGAGCGGGAGGCTACAAAAAGATTGGAGGAGAGAGTTCCTGTCATACATGAAGTTCCAGTTGTTGACCATGCTTTGTTAGAGAAGCTAAGTAGCGAAAATGAGAAACTCAAGAACTTGGTGAGTTCACTGGAAAAGAAAATTGACGAAACAGAAAAAAGGTATGAAGAGGAAGCTAAAGTTAGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAATCGAAAGTAATCCAGATGAAGACTGCCATGCAAAGGCTCGAAGAGAAATTCGCAGACATAGAATTTGCAAACCATGTTCTTCAGAAACAATCTCTGTTAAACTCACCTGTGAAAACAACAGTGGAGAACCTCTCTACCCCGGTATCTGAGAAGTTGGAAAATGGTCACCATGTGGCAGAAGAACCATATGATGCTGATACATATGTTACACCTGTAAAACAATTTGTTACCGAATCTGACGTGAAATTGAAGAGATCATGCAGTGAACGACATCATGGGAGTTTTGATTCACTTGTCAACTGTGTTAGTAAAAATATTGGGTTCAATCATGGAAAGCCTATTGGTGCATTTACTATTTACAAATGTCTTCTCCACTGGAAATCATTCGAAGCTGAAAGATCTAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCAATTGAGGATCAAGATGACAATGCTCTTATGGCCTATTGGCTGTCAAATACATCAGCATTGTTGTTTTTACTTGAACAAAGCCTGAAAACTGGGACTTCAACAAATGCAACCCCAAATGGAAAACCACCTAATCCAACATCCCTCTTTGGAAGAATGACCAAGAGTTTTCTTTCATCCCCTTCTTCCGCCAACCTTGCTTCCCCTTCATCAGTAGTACGCAAGGTAGAGGCCAAGTACCCTGCTTTGCTTTTCAAGCAGCAGCTCACAGCCTACTTGGAGAAAATATATGGCATCATCCGAGATAACTTGACAAAGGAGTTAACATCAGCTCTTGCACTATGTATCCAGGCACCAAGAACATCAAAGGGAGTGTTACGATCTGGCCGATCATTTGGTAAAGATTCCCCGATGGTTCACTGGCAGAGTATTATCGAATCCCTCAACACCCTCCTCTGTACACTGAAAGAGAACTTTGTTCCTCCAGTTCTTATCCGAAAGATCTTCAGTCAAACATTCGCATTTATTAATGTTCAACTCTTCAATAGTCTTCTAGTTCGTCCCGGTTGTTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAGCTGTGGTGCTGCCAAGCAAAGGAGGAGTATGCAGGATCGTCTTGGGATGAGCTCAAGCATATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGAATATCCTACGATGAAATCGTTAATGATTTATGCCCTATCTTGAGTGTTCAACAGCTATGTAAAATATGTACACTCTACTGGGACGACAACTATAATACACGAAGCGTATCTCCACATGTCCTTGCAAGCATGAGGATGGACTTGGACTCCAATGATGCTCTGAACGATTCTTTCTTGTTGGATGACAGTTCCAGCATTCCCTTCTCAGTAGATGACCTCTCTACATCTCTACAAGAGAAGGACTTTTCTGACATGAAACCAGCAGATGAACTTCTTGAGAATCCAGCATTCCAATTTCTAATTGAGTAG 4530 0.4088 MAAAANPIVGTHVWIEDSDIAWIDGEVVGANGEEIKVLCTSGKTVVVKASKIYHKDTEVPPSGVDDMTKLAYLHEPGVLNNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGVAFGELSPHPFAVADAAYRFMINEGISQSILVSGESGAGKTETTKLLMRYLAYMGGRAAVAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPAEVVKKYKLGHPRTFHYLNQSNCYELEGLDEAKEYIAIRRAMDVVGISIEDQDAIFQVVAAILHLGNIEFVKGEEIDSSMPKDEKSLFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDTINNSIGQDPESKSLIGVLDIYGFESFKNNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIISLLDEACMFPRSTHETFSQKLYQTFKDHKRFSKPKLSPSDFTICHYAGDVTYQTEFFLDKNKDYVVAEHQSLLYASTCPFVSGLFPPSPEETSKQSKFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNLLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKAFDEFIDRFGLLAPEVLDGSSDEVTACKRILKNVRLEGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSYLAHQSFISLRLSALQIQAACRGQLARQVFEGLRREASSLLIQRCFRMHIAKKAYKELYASAVSIQTGMRVMAAQCELYSRRRTSAAIIIQSHCRKYLALHNFMKLKKAAIATQCAWRGKVARRQLRKLKMAAKETGALQDAKNKLEKQVEDLTLRLQLEKRIRLDVEEAKAKENKRLQSALQEMQLQFKETKVLLEKEREATKRLEERVPVIHEVPVVDHALLEKLSSENEKLKNLVSSLEKKIDETEKRYEEEAKVSEERLKQALDAESKVIQMKTAMQRLEEKFADIEFANHVLQKQSLLNSPVKTTVENLSTPVSEKLENGHHVAEEPYDADTYVTPVKQFVTESDVKLKRSCSERHHGSFDSLVNCVSKNIGFNHGKPIGAFTIYKCLLHWKSFEAERSSVFDRLIQMIGSAIEDQDDNALMAYWLSNTSALLFLLEQSLKTGTSTNATPNGKPPNPTSLFGRMTKSFLSSPSSANLASPSSVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLTKELTSALALCIQAPRTSKGVLRSGRSFGKDSPMVHWQSIIESLNTLLCTLKENFVPPVLIRKIFSQTFAFINVQLFNSLLVRPGCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIVNDLCPILSVQQLCKICTLYWDDNYNTRSVSPHVLASMRMDLDSNDALNDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFLIE 1509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03210 1509 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 SMART MYSc_2a 56 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 Coils Coil 973 1049 - -
Mepo3g03210 1509 Coils Coil 878 958 - -
Mepo3g03210 1509 FunFam Myosin XI D 736 785 - -
Mepo3g03210 1509 Gene3D - 440 624 - -
Mepo3g03210 1509 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Mepo3g03210 1509 Pfam IQ calmodulin-binding motif 787 805 IPR000048 GO:0005515
Mepo3g03210 1509 Pfam IQ calmodulin-binding motif 762 779 IPR000048 GO:0005515
Mepo3g03210 1509 Pfam IQ calmodulin-binding motif 833 848 IPR000048 GO:0005515
Mepo3g03210 1509 Pfam IQ calmodulin-binding motif 857 876 IPR000048 GO:0005515
Mepo3g03210 1509 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Mepo3g03210 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 884 IPR027417 -
Mepo3g03210 1509 Pfam DIL domain 1333 1436 IPR002710 -
Mepo3g03210 1509 Pfam Myosin head (motor domain) 64 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 ProSiteProfiles IQ motif profile. 832 861 IPR000048 GO:0005515
Mepo3g03210 1509 CDD MYSc_Myo11 76 721 IPR036018 -
Mepo3g03210 1509 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Mepo3g03210 1509 ProSiteProfiles Myosin motor domain profile. 62 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 FunFam unconventional myosin-Va 834 882 - -
Mepo3g03210 1509 Gene3D - 253 311 - -
Mepo3g03210 1509 PANTHER MYOSIN 58 1445 - -
Mepo3g03210 1509 Pfam Myosin N-terminal SH3-like domain 9 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Mepo3g03210 1509 FunFam Myosin heavy chain 253 308 - -
Mepo3g03210 1509 Gene3D Kinesin motor domain 65 663 IPR036961 -
Mepo3g03210 1509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 786 IPR027417 -
Mepo3g03210 1509 Gene3D - 667 734 - -
Mepo3g03210 1509 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mepo3g03210 1509 SMART DIL_2 1332 1439 IPR002710 -
Mepo3g03210 1509 ProSiteProfiles Dilute domain profile. 1157 1457 IPR002710 -
Mepo3g03210 1509 FunFam Class V myosin 440 580 - -
Mepo3g03210 1509 Gene3D - 786 832 - -
Mepo3g03210 1509 Gene3D - 736 785 - -
Mepo3g03210 1509 Gene3D - 833 883 - -
Mepo3g03210 1509 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Mepo3g03210 1509 FunFam Myosin 2 313 431 - -
Mepo3g03210 1509 CDD MyosinXI_CBD 1108 1478 IPR037975 GO:0007015
Mepo3g03210 1509 SMART iq_5 783 805 IPR000048 GO:0005515
Mepo3g03210 1509 SMART iq_5 735 757 IPR000048 GO:0005515
Mepo3g03210 1509 SMART iq_5 758 780 IPR000048 GO:0005515
Mepo3g03210 1509 SMART iq_5 831 853 IPR000048 GO:0005515
Mepo3g03210 1509 SMART iq_5 854 876 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03210 Mepo-Chr3 42203043 42215976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03210 1 1507 Myosins gene family AT5G43900 73.681 0.0 2292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03210 K10357 - gmx:100795648 2605.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03210 3 42203043 42215976 Mepo3g03210 3 42203043 42215976 ECH
Mepo3g03210 3 42203043 42215976 Mepo4g02716 4 35903104 35922751 PCT