Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03188 ATGGCACGTGTATTTCCTCCATATCATCACAGAGTCCCGCATGGATTAAAAGTACTGGTTGTGGAAGATGATGATCTTGTTCGAATGGCTCATAGATATATCTTGACATTACTTGGTGTGGAAACTCACGCAGTCAAAAATGGTAAAGAAGCCTTAGACCTCATTAGCACGGTTGAACGTAAATTCGACCTCATTCTCATGGGTAGGATCATGCCCGTCATGGATGGAATTACGGCAACAAAGAAGCCGCGCGATTTAAAATACCCTGGTCAGATTGTTGGTGTCTCATGTCGCCTTACAAATGATGAATATGCTGAATTTCGCAATGCAGGGCTAGATGATCTACATCATGAAGATGGAATACCCTTGCAATATGATGTATTGAAACTAATTTTGAAAAGGGTTCTTCCTCTCAACTAG 420 0.4143 MARVFPPYHHRVPHGLKVLVVEDDDLVRMAHRYILTLLGVETHAVKNGKEALDLISTVERKFDLILMGRIMPVMDGITATKKPRDLKYPGQIVGVSCRLTNDEYAEFRNAGLDDLHHEDGIPLQYDVLKLILKRVLPLN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03188 139 SUPERFAMILY CheY-like 14 136 IPR011006 -
Mepo3g03188 139 SMART REC_2 16 131 IPR001789 GO:0000160
Mepo3g03188 139 Gene3D - 4 117 - -
Mepo3g03188 139 ProSiteProfiles Response regulatory domain profile. 17 136 IPR001789 GO:0000160
Mepo3g03188 139 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 118 - -
Mepo3g03188 139 CDD REC_hyHK_CKI1_RcsC-like 18 132 - -
Mepo3g03188 139 Pfam Response regulator receiver domain 18 114 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03188 Mepo-Chr3 42048914 42049542 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03188 16 113 Response Regulator Gene Family AT3G04280 42.424 1.17e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g03188 Response_reg 7.9e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03188 - - cam:101493171 114.39