Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03170 ATGGCACCCAATCCGAAGGTTGTAGCTGCGTTTCGCGCAATGTCCTGCCTTGGGATTGAGGAACACAAAGTCAAACCTGTCTTGAAGAAACTGCTTAAATTGTATGATAAAAACTGGGAACTTATTGAACAAGAGAATTATCGGGCTCTTGCTGATGCTATTTTCGACGAAGATGATAATCAGGCGATGGAGCCGGAGCAGGATAAGAAAAACAAGGAAGGGGAGGTGGATGAGGAATCTCGTCCAGAAGAGCGAGTGCGGCCTTTGAAGAGGTTGAAATTAAGAGGCCAAGACGGGCGCCTTCTGAATAGCGGTGGCTCAAGTACATCTGCCTTTGCATTGAAAACACCGAAACCAGAACCTGGTACAGTACCCGAAAGTAGTTCCAGACTGCTATCCAATGGAAATGCCGTTGTTGACAAGGGAAAGAAGCCTGCATCACCTGAAGAACCTCTAAGAGGGAGAAGATCTATATCTGACAGAACTCAACCTGCAGTTGTGTTTAGAGAACCGGCTGTTGGACCAGGAGCCTCTCCGTTGTCAAAAAACAAAACGCCTCATGCTTACCCTTTTATCACCCCCAAGGATGAGCCTGTTGATGAAGTGGAAGATGATTACACGGTCCCACTTTCAATGATTCTTCCTGAACCATCAAGTGTTCCAGACTCTTCAACGAAGAATGATACAGCCGGAGAGCAAGATGGCAACAACACTGTGGCATCACCATACAGAAACGAAAATGTTGAAGGTGAAGATATTCTTCCTTCCTCAAATGAAGAAGTGCCTTTTAATGCCGAGCTAGCCTCATCGTCTACGGGAGAGGAAGCATCTGCAAAGATAACGCCAACAGTTGGCCTTTCAAAAGAATCTGAGGCAAATGGCACACTAATTGACGGAGGAAATAAAGATTCTTGTGTTGCAAATGGATCAATCTCTGTCAAGTCTTCTCCTGCCTCGGTCGCACCTCAAGTTCTCGTTTCTCCACCCTGCCCAAGTGGTCCAGATGATGCTGTACTAGTTTCCAAGGATGTAATGAATGATTTATCGGAAAATGGTGGTGGGAAGGAGTCAGGGGAACCTATGCCTCAAAATTCCTGCAATGTAATGAATGCTCCAAACCATCATCATACAATTGATGATACAAGGGCTGTTTGTGCTACCAATGACCTAACAAAGGGAGAAGAAAAAGTGAAAATTTCATGGGTGAATAATTCTAATAATGATATCCCACCTCCGTTCCACTACATACCCCGTAACTTGGTGTTCCGAGATGCATATGTTAATATGTCTCTATCTTGTATTGGGAGTGAAGATTGTTGTTCTACCTGTATGGGCAATTGTGTCATATCATCTAAACCATGTTCTTGTGCAAATAAAACTGGAGGGGATTTTGCCTACACTGCACAAGGTGTACTAAAGGAAGCGTTCTTGGAAGAGTGTATTGCCATCAGCCGTGATCCACAAAATCATTCCTATTGCACAGAATGCCCACTTGAAATATCAAAGAATGATGGTTGTTTAGAACCATGTAAAGGACACTTGAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGCTGTGGGAAACGTTGTGGCAATCGGATTGTCCAACGTGGAATAGCTTGCAACTTGCAGGTGTTTTTAACTTCAAACGGAAAAGGGTGGGGTCTTCGTACCTTAGAGGATCTTCCAAAAGGTGCATTTGTATGCGAGTTTGTTGGAGAAATTTTAACCGTCGAAGAGTTGCATGAGAGGAACTTGAAATATCCCAAAAATGGGAAACATACGTTCCCAATTTTATTGGATGCAGAATGGGGCTTGGGAGCTGTAAAGGATAACCAAGCTCTTTGCTTATATGCGGCATCATATGGAAATGCTGCTAGGTTTATTAATCACAGATGTTTAGATGCAAACTTGATTGAGATCCCGGTTGAAGTTGAGGGTCCATCTCATCACTATTATCATTTTGCCTTCTTCACATCCAGAAAAATTGCAGCACAGGAAGAGTTGACCTGGGATTATGGTATCGATTTTGATGACGATGATCAGTCTCTGGAGCTGTTCCGGTGCAAATGCGGCAGTAAATTCTGCAGGAATATGAAGCGCTCAAATAGAAGCATTAGATCGTCAATTGCTGGGTGA 2145 0.4359 MAPNPKVVAAFRAMSCLGIEEHKVKPVLKKLLKLYDKNWELIEQENYRALADAIFDEDDNQAMEPEQDKKNKEGEVDEESRPEERVRPLKRLKLRGQDGRLLNSGGSSTSAFALKTPKPEPGTVPESSSRLLSNGNAVVDKGKKPASPEEPLRGRRSISDRTQPAVVFREPAVGPGASPLSKNKTPHAYPFITPKDEPVDEVEDDYTVPLSMILPEPSSVPDSSTKNDTAGEQDGNNTVASPYRNENVEGEDILPSSNEEVPFNAELASSSTGEEASAKITPTVGLSKESEANGTLIDGGNKDSCVANGSISVKSSPASVAPQVLVSPPCPSGPDDAVLVSKDVMNDLSENGGGKESGEPMPQNSCNVMNAPNHHHTIDDTRAVCATNDLTKGEEKVKISWVNNSNNDIPPPFHYIPRNLVFRDAYVNMSLSCIGSEDCCSTCMGNCVISSKPCSCANKTGGDFAYTAQGVLKEAFLEECIAISRDPQNHSYCTECPLEISKNDGCLEPCKGHLKRKFIKECWSKCGCGKRCGNRIVQRGIACNLQVFLTSNGKGWGLRTLEDLPKGAFVCEFVGEILTVEELHERNLKYPKNGKHTFPILLDAEWGLGAVKDNQALCLYAASYGNAARFINHRCLDANLIEIPVEVEGPSHHYYHFAFFTSRKIAAQEELTWDYGIDFDDDDQSLELFRCKCGSKFCRNMKRSNRSIRSSIAG 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03170 714 CDD SET_SETDB-like 411 676 - -
Mepo3g03170 714 Gene3D SET domain 390 701 IPR046341 -
Mepo3g03170 714 SMART set_7 543 682 IPR001214 GO:0005515
Mepo3g03170 714 Gene3D - 1 60 IPR043017 -
Mepo3g03170 714 Pfam Pre-SET motif 391 535 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g03170 714 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 713 IPR025776 -
Mepo3g03170 714 MobiDBLite consensus disorder prediction 63 97 - -
Mepo3g03170 714 MobiDBLite consensus disorder prediction 262 286 - -
Mepo3g03170 714 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Mepo3g03170 714 ProSiteProfiles Pre-SET domain profile. 429 540 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g03170 714 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 709 - -
Mepo3g03170 714 SMART preset_2 387 527 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo3g03170 714 MobiDBLite consensus disorder prediction 217 244 - -
Mepo3g03170 714 MobiDBLite consensus disorder prediction 143 157 - -
Mepo3g03170 714 MobiDBLite consensus disorder prediction 62 286 - -
Mepo3g03170 714 Pfam SET domain 555 676 IPR001214 GO:0005515
Mepo3g03170 714 SUPERFAMILY SET domain 397 699 IPR046341 -
Mepo3g03170 714 ProSiteProfiles SET domain profile. 543 676 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03170 Mepo-Chr3 41818380 41825132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03170 381 699 Su(var)3-9 homologs AT1G73100 29.762 5.04e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo3g03170 Pre-SET 1.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03170 - - gmx:100809678 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03170 3 41818380 41825132 Mepo3g03170 3 41818380 41825132 ECH
Mepo4g02744 4 36182290 36187840 Mepo3g03170 3 41818380 41825132 PCT