Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03167 ATGGAAGCTCGTCCTGCTTTCTCAATTGAAAGATCAAGTGCCCAGCAACTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCCCTAGAGGAGACATACCCCCGATTTTCTGATTCGCAGCCGACTTATTTGGAAAAAGATCTTAAGACAAAAACTTTTAATCATTCAAGTCATATAAGTTCCAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCAACCGATCTTCATCACTCATCCCTTTCACCTCATGAAAAACACTCTAGAAGTGCTCATTTTATGTCACAGTCATTGAGTAACATGGCTTCGGTGCCATTACCGTATTCTTCAAATAATGGACCGGTACCTTCTACAACATCAACACATTATTCCAATGGAAACAGTGCTTCATGGCATGCAGATCCCCTGCCTAGTTTTCTTGATTTCTCTGCAAATGCCTCAATTGATAATAACCAAGTAGAGAGCGGTGCCTGCAATATGATGGCCACCGAGGAATTTTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGACGATACTCTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGCGGTGGAATCCATTTCAAAGTCATCTTCACAATTTCCAGCAGGACACCAATCTCAAGACCACCGACAACTTCCAGCTCTATCTGGAGAAAACCATGTTGGTGTCGCTCCATCTTCCTCAGCAAATTCTGCAACAGGCAAGCCACGGATGCGTTGGACTCCTGAGCTTCACGAAGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAGGGTGTGTTGAAGCTCATGAAAGTTGAAGGATTGACTATATATCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGAGCTGGAGAGAAAAAACTAAGCCCCATTGAAGACATTTCATCTCTAGATTTGAAAACTGGTATTGAGATCACAGAAGCTCTACGGCTGCAGATGGAGGTCCAGAAACGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGCAGGTACCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGTTGAACCATTTAAGGCATCATCGTCAGCCATTGAGAATCCATCTGGAGTGTCTTCTGACACCATGAAAGACTCTCCTACCAAAAATGAATTGGAAGCATCCAAAATGGACCATTGCAAGTCAGGACCTGATCAAGCTAATGGTAGTACCACAGTTGAGGAAAGCTCGCTGGAAGCAGTTGAGAAGCTGGATACCTCCAAATCTGAACAAGCTTCTAAGGATCTTGAGCAAAATGAAAATGAAGATAGCCCTCAAGCCCCTAAACGTCAAAGGACAGATGAGTAA 1470 0.4347 MEARPAFSIERSSAQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYLEKDLKTKTFNHSSHISSSGAVGHMFSSSPGYSTDLHHSSLSPHEKHSRSAHFMSQSLSNMASVPLPYSSNNGPVPSTTSTHYSNGNSASWHADPLPSFLDFSANASIDNNQVESGACNMMATEEFSKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAVESISKSSSQFPAGHQSQDHRQLPALSGENHVGVAPSSSANSATGKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTMKDSPTKNELEASKMDHCKSGPDQANGSTTVEESSLEAVEKLDTSKSEQASKDLEQNENEDSPQAPKRQRTDE 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03167 489 MobiDBLite consensus disorder prediction 399 489 - -
Mepo3g03167 489 SUPERFAMILY Homeodomain-like 261 316 IPR009057 -
Mepo3g03167 489 Coils Coil 350 370 - -
Mepo3g03167 489 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 234 480 IPR044848 GO:0003700
Mepo3g03167 489 MobiDBLite consensus disorder prediction 420 434 - -
Mepo3g03167 489 MobiDBLite consensus disorder prediction 84 136 - -
Mepo3g03167 489 NCBIfam myb-like DNA-binding domain, SHAQKYF class 262 316 IPR006447 GO:0003677
Mepo3g03167 489 Gene3D - 261 320 - -
Mepo3g03167 489 FunFam Myb family transcription factor 261 319 - -
Mepo3g03167 489 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Mepo3g03167 489 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Mepo3g03167 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 266 319 IPR017930 -
Mepo3g03167 489 MobiDBLite consensus disorder prediction 399 419 - -
Mepo3g03167 489 MobiDBLite consensus disorder prediction 452 489 - -
Mepo3g03167 489 MobiDBLite consensus disorder prediction 103 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03167 Mepo-Chr3 41753155 41759440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03167 1 440 G2-like Transcription Factor Family AT4G28610 48.879 6.97e-112 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g03167 Myb_DNA-binding 9.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03167 - - gmx:100810560 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03167 3 41753155 41759440 Mepo3g03167 3 41753155 41759440 ECH
Mepo3g03167 3 41753155 41759440 Mepo4g03264 4 42150762 42155092 ECH
Mepo3g03167 3 41753155 41759440 Mepo4g03264 4 42150762 42155092 PCT