Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03166 ATGGCAAATATTCAAAAGGCTATTGCTCTTGTCTTTTATATACTACTTATATCTTTACTTCCATTTCAAATCACAGCATCACTAAAATCAGAAGCAGAAGCTCTTGTCAAATGGAAAAACAGTCTAAACCCTCCTTTGCCTTCCTCTCTTAACTCATGGTCGCTCACCAATCTTATCAACCTTTGCAGTTGGAATGCTGTTGTTTGTGACAACACCAATACAACTGTCTTAAACATAAACTTGTCTAATGCCAATCTCAGTGGAACACTCACTGACTTGGATTTTGCATCCCTCCCAAACCTCACCCTCCTCAACCTCAATGGCAACAGTTTTGGTGGATCAATACCATCAACAATTGGCAAACTCTTCAAGCTCAATTTCTTAGACTTGCGAAACAATTTTTTTGAAGACGCGCTACCATCTGAGCTAGGCCAGTTAAGGGAACTTCAATATGTTAGTTTTTACAACAACAGTCTCAATGGTACCATTCCCTATCAACTCACTAATCTTCCCAAGGTAAGTTACCTTGATCTTGGATCAAACTTTTTTGTATCTTCCCTTGATTGGTCTCAATATTCAAACATGCCTTCCTTAAATTACCTTGGTTTGGAAGAAAATGAATTCACCGGTAACATTCCAAGTTTCATACTTGAGTGCAAGAACTTAACATATCTTGACCTCTCTCAGAACAATTGGAATGGTACCATACCAGAATTCCTTTATGGTAATTTAGGAAAGCTTGAATATCTCAACCTCACCAACTGTGGATTGGACGGAACACTATCATCCAACTTGTCCATGCTTTCGAATCTCAAAGATCTTCGCATTGGAAATAACATGTTTAATACTCATATTCCAACAGAGATAGGATTGATATCTAAGCTTCAATTTCTTGAGCTGAACAACATTTCAGCTCATGGGCAAATTCCTTCTTCCATAGGTCAACTAAAGGAGTTAGTGCATCTTGATCTCAGTGCTAACTTTTTGAACTCTAAAGTCCCTTCTGAGTTTGGCCTATGTACAAATCTAACTTTCTTGAGCTTAGCAGCAAATAACCTGACAGGTTCTTTGCCTTTGTCATTAGCAAATTTAACCAAACTATCAGAACTAGGATTATCAAGTAATTTCTTTTCTGGTAAGATTTCTGCTTCATTGATCTCTAATTGGACTGAGTTAACTTCCTTGCAACTCCAAAACAATAGTTTAACCGGAAAGGTGCCTCCACAGATTGGCCTGTTGAAAAAAATTATAATCTTGCTTCTGTACAATAATATGTTATCTGGTCCAATCCCTGATGAGATAGGAAACTTGAAGGTAATGACAGGGTTAGACCTTTCAGGAAACCACTTCTCTGGTCCAATTCCATCAACCATATGGAATCTCACAAACATAACAGTCATAAATCTTTTCTTCAACAACCTCTCTGGTAACATTCCAATGGATATTGGAAACTTAACTTCACTGCAAATTTTTGATGTCGACAATAATAATTTGGAAGGAGAATTGCCAGACACAATTGCTCATCTAACTGCCTTAACTTCTTTTTCTGTGTTCACCAATAACTTCTCAGGAAGCATTTCCAAAGATTTTGGAAAGAATAGTCCTTCTTTGACTCATGTCTACTTTTCAAACAATAGTTTCTTAGGAGAACTTCCTTCTGAATTATGCAGTGGCCACAATCTAGTTGTTTTGGCAGTAAACAACAACTGCTTTTCCGGGCCATTGCCAAACTCCTTGAGAAATTGTTCATCCTTAACAAGAGTTAGGCTTGATGATAACAAGTTCAGTGGAAACATCACAGAATCATTTGGGATTCATCCAAATCTTAATTTCATCTCGCTAAGTCGAAATCATCTTGTTGGCCATCTCTCTCCAATGTGGGGTAAATGTATCAGCTTAACTGCAATGGAAATGAGTGGAAACAAACTTTCTGGAAAAATCCCATCTGAGCTAAGTAAGTTGAGTAAATTACAGTTTCTTAGCTTGCACTCCAACAAATTCTCCGGAAATATCCCACCTGAAATTGAAAATCTCAGTCTGCTCTTCATGTTGAACTTGAGCAGGAACCATTTATCAGGAGAAATCCCAAAGAGTATTGGAAGATTATCTCAACTTAATATTGTTGATTTATCAGATAATAACTTCAGTGGAAGCATTCCTAAAGAGCTCAGTAATTGTAATCGGTTACTAAGCCTGAACTTCAGTCATAACAATCTATCTGGTGTGATACCATATGAACTTGGCAATCTATTCTCCCTCCAATACTTGTTAGACCTCAGCAGCAACAATCTTTCAGGAGAAATTCCTCAAAACCTTCAAAAGTTAGCAACATTGGAGATTCTCAATGTCTCACACAACAATCTATCTGGAACAATCCCACAATCCTTTTCAAGTATGATCAGCCTTCAATCTGTGGATTTTTCTTACAACCACTTGTCAGGTTTGATACCAACAGGTGGTGTTTTCCAGACAGAAACCGTTGAAGCTTTTGTTGGGAACCCAGATTTGTGTGGTGATGTAAAAGGATTAAGATGTGCGGCAATATCATCTCAAGAAGGTTCTGGAGGGGCCAACAAAAAGGTACTTCTTGGTGTTACTATATCAGTTGGTGGAGGACTATTTATAGGGATGATTTGTGCTGGAATCTTATTCTATCAAAGGCAAGAAAAAAAACACGGTGAAGAATCCAAAAACATTGAAGATAATGATCAGAGTACTTTGTGCATGGTATGGGGAAGAGATGGAAAATTCACATTTTCTGATCTTGTTAAAGCAACCAATGATTTCAATGAAAAGTACTGCATTGGAAAAGGAGGATTTGGAAGTGTTTATAGAGCAGAACTACTTACAGGTCAGGTAGTTGCTGTCAAAAGACTCAATATATCAGACTCTGATGACGTTCCAGAAGTGAACCGCACGAGCTTCATGAATGAGATAAGAACGCTAACAGAAGTGAGGCACCGGAATATAGTAAAGCTATATGGTTACTGTTCTAGTAGGAAACAAATGTTCCTGGTTTATGAACATGTAGAGAAAGGAAGCTTGGGAAAAGTTTTATATGGAGGAGAAGGAAAATTGGAGCTAAGTTGGAGTACAAGGGTGAAAATTGTGCAAGGAATAGCTCATGCAATCGCTTACCTGCATAGTGATTGCTCTCCACCAATTGTGCACAGAGATATAACATTGAATAACATACTACTTGATTCAGATTATGTACCTCATCTTGCAGATTTTGGCACTGCAAAGCTGCTAAGCTCTAACAATTCGACTTGGACCTCAGTTGCTGGATCCTATGGCTACATGGCGCCAGAGCTAGCACAAACTATGAGGATGACTGAAAAGTGTGATGTGTATAGTTTTGGAGTGGTGGTGTTAGAGATAATGATGGGAAAGCACCCTGGAGAATTCTTGGGCACCTTAAATTCAAACAAATCTTTAGCATCAATGGAAGTGCTTGTCAAGGATGTTCTGGACCAACGACTTCCACTTCCAACAGGAAAATTATGTGAAATAATAGTGTTCATAATGACAGTAGCTTTAGCATGCACGCGTGCTTCTCCTGAGTCTCGGCCCATGATGCGTTCTGTTGCACAAGAATTATCTGCTGCTACACAGGCTAGTCTCTCATAA 3630 0.3843 MANIQKAIALVFYILLISLLPFQITASLKSEAEALVKWKNSLNPPLPSSLNSWSLTNLINLCSWNAVVCDNTNTTVLNINLSNANLSGTLTDLDFASLPNLTLLNLNGNSFGGSIPSTIGKLFKLNFLDLRNNFFEDALPSELGQLRELQYVSFYNNSLNGTIPYQLTNLPKVSYLDLGSNFFVSSLDWSQYSNMPSLNYLGLEENEFTGNIPSFILECKNLTYLDLSQNNWNGTIPEFLYGNLGKLEYLNLTNCGLDGTLSSNLSMLSNLKDLRIGNNMFNTHIPTEIGLISKLQFLELNNISAHGQIPSSIGQLKELVHLDLSANFLNSKVPSEFGLCTNLTFLSLAANNLTGSLPLSLANLTKLSELGLSSNFFSGKISASLISNWTELTSLQLQNNSLTGKVPPQIGLLKKIIILLLYNNMLSGPIPDEIGNLKVMTGLDLSGNHFSGPIPSTIWNLTNITVINLFFNNLSGNIPMDIGNLTSLQIFDVDNNNLEGELPDTIAHLTALTSFSVFTNNFSGSISKDFGKNSPSLTHVYFSNNSFLGELPSELCSGHNLVVLAVNNNCFSGPLPNSLRNCSSLTRVRLDDNKFSGNITESFGIHPNLNFISLSRNHLVGHLSPMWGKCISLTAMEMSGNKLSGKIPSELSKLSKLQFLSLHSNKFSGNIPPEIENLSLLFMLNLSRNHLSGEIPKSIGRLSQLNIVDLSDNNFSGSIPKELSNCNRLLSLNFSHNNLSGVIPYELGNLFSLQYLLDLSSNNLSGEIPQNLQKLATLEILNVSHNNLSGTIPQSFSSMISLQSVDFSYNHLSGLIPTGGVFQTETVEAFVGNPDLCGDVKGLRCAAISSQEGSGGANKKVLLGVTISVGGGLFIGMICAGILFYQRQEKKHGEESKNIEDNDQSTLCMVWGRDGKFTFSDLVKATNDFNEKYCIGKGGFGSVYRAELLTGQVVAVKRLNISDSDDVPEVNRTSFMNEIRTLTEVRHRNIVKLYGYCSSRKQMFLVYEHVEKGSLGKVLYGGEGKLELSWSTRVKIVQGIAHAIAYLHSDCSPPIVHRDITLNNILLDSDYVPHLADFGTAKLLSSNNSTWTSVAGSYGYMAPELAQTMRMTEKCDVYSFGVVVLEIMMGKHPGEFLGTLNSNKSLASMEVLVKDVLDQRLPLPTGKLCEIIVFIMTVALACTRASPESRPMMRSVAQELSAATQASLS 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03166 1209 FunFam MDIS1-interacting receptor like kinase 2 193 386 - -
Mepo3g03166 1209 CDD STKc_IRAK 935 1200 - -
Mepo3g03166 1209 FunFam Leucine-rich repeat receptor protein kinase MSP1 890 1009 - -
Mepo3g03166 1209 Pfam Leucine rich repeat 171 231 IPR001611 GO:0005515
Mepo3g03166 1209 Gene3D Ribonuclease Inhibitor 189 242 IPR032675 -
Mepo3g03166 1209 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Mepo3g03166 1209 ProSiteProfiles Protein kinase domain profile. 929 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03166 1209 SUPERFAMILY Protein kinase-like (PK-like) 909 1200 IPR011009 -
Mepo3g03166 1209 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 432 530 - -
Mepo3g03166 1209 ProSitePatterns Protein kinases ATP-binding region signature. 935 957 IPR017441 GO:0005524
Mepo3g03166 1209 SMART LRR_typ_2 775 798 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 316 340 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 654 678 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 702 726 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 195 219 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 799 824 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 122 146 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 98 121 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 268 292 IPR003591 -
Mepo3g03166 1209 SMART LRR_typ_2 485 509 IPR003591 -
Mepo3g03166 1209 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Mepo3g03166 1209 FunFam MDIS1-interacting receptor like kinase 2 1010 1206 - -
Mepo3g03166 1209 Gene3D Transferase(Phosphotransferase) domain 1 1010 1208 - -
Mepo3g03166 1209 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1055 1067 IPR008266 GO:0004672|GO:0006468
Mepo3g03166 1209 Pfam Protein kinase domain 931 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03166 1209 SUPERFAMILY L domain-like 59 382 - -
Mepo3g03166 1209 Pfam Leucine Rich Repeat 778 798 IPR001611 GO:0005515
Mepo3g03166 1209 PANTHER LEUCINE RICH REPEAT KINASE 2 482 1204 - -
Mepo3g03166 1209 FunFam Nuclear pore complex protein NUP107 28 189 - -
Mepo3g03166 1209 SUPERFAMILY RNI-like 285 619 - -
Mepo3g03166 1209 Gene3D Phosphorylase Kinase; domain 1 889 1009 - -
Mepo3g03166 1209 Gene3D Ribonuclease Inhibitor 481 846 IPR032675 -
Mepo3g03166 1209 Gene3D Ribonuclease Inhibitor 243 480 IPR032675 -
Mepo3g03166 1209 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 534 849 - -
Mepo3g03166 1209 SUPERFAMILY L domain-like 602 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03166 Mepo-Chr3 41741731 41745874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03166 14 670 Receptor kinase-like Gene Family AT4G08850 31.825 1.43e-78 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g03166 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03166 - - gmx:100809137 1741.86