Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03149 ATGGGGAGTAGGGATAAGCAACGGGGGAAGAGATTGCAGAAGATAATGAAGTGCTTTTGCTCAGGGGATATGGTTAAAGAAGAAGAAACAATGGTTCCTAATTCGTCGGAATCTCTTGCAACTAAGGATTATTTTTCCTCGACGGCAAGTGGGATTTCTGGCCAAGATGGACAAGTTGAGAGGAGGCTGGATTCTGGTAACATAGAACAAGCTGAATCGTCGTTGCGTGAGAGTGGTATCTTGAACTATGAGGAAGCTAGAGCTTTGTTAGGGAGATATGAATATCAGGAAGGAAATATAGAAGCCGCTTTGCATGTTTTTGAAGGCATAAACATAGCTGCTGTGACTCCTAAGATAAAAGTTTTCCTTGCCAAAAGCAGAGAACCCCCCAAGAGACGCTCTCGGAATAACACTACTCCACCAATGTCTATACATACAGCTGGATTACTTTTAGAGGCGATCTTGCTAAAGGCAAAATGTTTGCAGGTTCTTGCAAGGTTTGAAGAATCAGCCCAAACATGCAAAATTATTCTGGACTTGATTGAGTCTTCTTTACCGGAAGGCTTACCTGGAAACTTTGGTTCCGAATGTAAATTGCAGGAGACAGTAAGTAAGGCAGTTGAGCTACTTCCAGAGTTATGGAAACTTGCTGATTGTCCACGTGAAGTTATTTTGTCTTATCGGAATGCACTCCTTCATCGATGGAATCTTGATGCAGGTACCACAGCAAAAATTCAGAAAGAATTTGCCATTTTTCTTCTATATAGTGGAGGGGAAGAAATCCCCTCAGATCTTCGTTCCCATATGGACAGTTCATTTGTACCAAGAAATAACATTGAAGAGGCCATACTTCTTTTAATGATTTTGCAAAGAAAAATCTCTATAAATAAAATTGAGTCGGATCCTTCAATAATGGAGCACCTTTCGTTTGCTCTATCGGTTTCCGGGGATCTGACAGCTTTAGCCAACCAATGGGAAGAATTACTCCCTGTTACTATCAATCGAAGAGAAAGGTACCATGCCCTTGCTCTTTGTTATTATGGAGCAGATAAGGATTTGGTGGCACTTAATCTTCTTAAAAAGTTGTTGAATAGCAGTGAGGATCCAAAACATGTTCCTGCTTTGTTAATGGCTTCTAAGATATGTTGCGAGAACCCTGACCTTGCAAAAGATGGGGTTAGCTATGCTTGCAGAGCGCGTGAGAACTTGGTTGAAAAATGTAATCAGTTGGAAAGTCTAGCCAATTGCTTACTCAGTGTTTCGCTTTCAACATACTCAAAATTTGCTGTTTCTAACTCTGAGAGGTTTGAGAGACAATCTGAGGCACTTCATTCACTAGAAACTGCAAGCACTATGACCAAAATGAAGGAACCTCTTGTACTTTACTATTTAAGTTTAGAATGTGCAGAGCAAAGGAAGTTGGATTCTGCACTTTGTTATGCAGAACGCTTTCTAAGCTTAGAAGCTGGGTCTAATATTAGAGGCTGGTTATTGTTAGCCCGAATATTATCAGCACAAAAACAGTTTTTGGATGCTGAAGGTATTGTAGATGCTGCTTTGGATCGGACTGGAATATGGGATCAAGGAGATTTGTTGCGAACAAAAGCTAAACTGCAAATTGCACAGGAGAAGTTGCCAAGTGCCATTGAGACATATACTCAGCTTCTTGGTATTCTTCTGGTTCAGAGAAAAACTTTTGGGTCAAAAACGAAGCTATATAAGGACAACAGAGATCATGCTAGGAACTTGGAAGTGGAAATATGGCATGATCTTGCTTATATATACATACGTCTATCGCGGTGGCATGATGCAGAAGTGTGTCTTTCAAAATCTAAGGCCATCAAACTACACTCTGCTTCTAGATGTCATGTAATAGGTACTATGCTCGAAGCCAAGGGTCTTTACAAAGAGGCTCTTAAAGCTTTTCGCGATGCTTTGAACCTTGATCCCGGACATATCCCTAGCTTGATCTCAACCGCTGTGGTTCTTAAACGGGACGGTACTCAATCAAATCCTGCTGTTAGAAGCTTTCTGATGGAAGCACTACGGCTTAACAGATCAAATGCTTCTGCTTGGTATCATCTTGGTATTCTTCACAAGGCTGAAGGTAGAATGTCAGAAGCTGCCGAATGTTTTCAAGAAGCAAACTCTCTTGAAGAATCAGAACCAGTGGAACCTTTCAGATGA 2187 0.4102 MGSRDKQRGKRLQKIMKCFCSGDMVKEEETMVPNSSESLATKDYFSSTASGISGQDGQVERRLDSGNIEQAESSLRESGILNYEEARALLGRYEYQEGNIEAALHVFEGINIAAVTPKIKVFLAKSREPPKRRSRNNTTPPMSIHTAGLLLEAILLKAKCLQVLARFEESAQTCKIILDLIESSLPEGLPGNFGSECKLQETVSKAVELLPELWKLADCPREVILSYRNALLHRWNLDAGTTAKIQKEFAIFLLYSGGEEIPSDLRSHMDSSFVPRNNIEEAILLLMILQRKISINKIESDPSIMEHLSFALSVSGDLTALANQWEELLPVTINRRERYHALALCYYGADKDLVALNLLKKLLNSSEDPKHVPALLMASKICCENPDLAKDGVSYACRARENLVEKCNQLESLANCLLSVSLSTYSKFAVSNSERFERQSEALHSLETASTMTKMKEPLVLYYLSLECAEQRKLDSALCYAERFLSLEAGSNIRGWLLLARILSAQKQFLDAEGIVDAALDRTGIWDQGDLLRTKAKLQIAQEKLPSAIETYTQLLGILLVQRKTFGSKTKLYKDNRDHARNLEVEIWHDLAYIYIRLSRWHDAEVCLSKSKAIKLHSASRCHVIGTMLEAKGLYKEALKAFRDALNLDPGHIPSLISTAVVLKRDGTQSNPAVRSFLMEALRLNRSNASAWYHLGILHKAEGRMSEAAECFQEANSLEESEPVEPFR 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03149 728 SUPERFAMILY TPR-like 531 719 IPR011990 GO:0005515
Mepo3g03149 728 PANTHER PROTEIN NPG1 16 728 IPR043376 -
Mepo3g03149 728 SMART tpr_5 493 526 IPR019734 GO:0005515
Mepo3g03149 728 SMART tpr_5 151 184 IPR019734 GO:0005515
Mepo3g03149 728 SMART tpr_5 619 652 IPR019734 GO:0005515
Mepo3g03149 728 SMART tpr_5 585 618 IPR019734 GO:0005515
Mepo3g03149 728 SMART tpr_5 689 722 IPR019734 GO:0005515
Mepo3g03149 728 ProSiteProfiles TPR repeat profile. 619 652 IPR019734 GO:0005515
Mepo3g03149 728 Pfam Tetratricopeptide repeat 689 720 IPR019734 GO:0005515
Mepo3g03149 728 Pfam Tetratricopeptide repeat 620 651 IPR019734 GO:0005515
Mepo3g03149 728 ProSiteProfiles TPR repeat profile. 689 722 IPR019734 GO:0005515
Mepo3g03149 728 SUPERFAMILY TPR-like 339 556 IPR011990 GO:0005515
Mepo3g03149 728 Gene3D Tetratricopeptide repeat domain 271 584 IPR011990 GO:0005515
Mepo3g03149 728 Gene3D Tetratricopeptide repeat domain 585 725 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03149 Mepo-Chr3 41592162 41597797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03149 10 728 Calmodulin-binding Proteins AT4G28600 54.150 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03149 K21843 - gmx:100809498 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03149 3 41592162 41597797 Mepo3g03149 3 41592162 41597797 ECH
Mepo4g02755 4 36247653 36251562 Mepo3g03149 3 41592162 41597797 PCT