Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03141 ATGGATCATGTGATTGCTGGGAAGTTTAAATTGGGGAGGAAAATTGGAAGTGGGTCTTTTGGGGAGCTTTATATAGCTGTTAATGTACAAACTGGGGAGGAGGTTGCTGTTAAGCTGGAACCTGTGAAGACCAAGCATCCACAACTTCACTATGAATCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGGTTCCTCACTTGAAGTGGTTTGGAGTTGAGGGAGAATACAATGTGATGGCAATTGATCTTCTTGGACCCAGTCTGGAAGATCTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGACGGTTTTGATGCTTGCTGATCAGTTAATTAACAGAGTTGAATACATGCATTCAAGAGGTTTCCTTCATCGTGACATAAAGCCAGACAATTTTTTAATGGGCCTAGGGCGTAAAGCAAACCAGGTCTACATCATTGACTATGGCCTCGCCAAAAAATTCAGAGATCTTCAGACTCATAGGCACATACCGTACAGGGAAAACAAGAACCTTACAGGCACGGCTCGGTACGCGAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTGAAAGCGGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGAAGAAGATGACAACTTCCATAGAGGTGCTCTGCAAATCATATCCGTCCGAATTTACATCATACTTTCACTACTGCCGATCATTGCGGTTCGAAGACAAGCCTGACTATTCATATTTGAAGAGGCTTTTTCGAGATCTATTTATCCGAGAAGGCTATCAATTTGACTATGTTTTTGACTGGACTATACTGAAGTATCCGCAAATTAGTGGCAGTAGCTCAAGAGGGCGGCATGACAGTGGCAAGGCGGCTATGAATGCAGGGCCATCTGTACAGAGGCCAGAAAAGTTATCAGTTGGGAAAGAGCTTCGAGAGAGATTCACTGGTGCTGTTGAAGCATTCTCGCGGAGGAACCCAACAAGTTCTAGTCCTCGCGGTGAGCACTCCATACATAGGAGTTTTGAGGATGTAGCAGCCATGCACAAGGACGCGTATCATGATCAAGACAAGGGTCGCAATTTGGGTCGACATGGTAGCAGTTCAAGAAGACCAATAATCTCATCATCAACCAAGCCAAGTTCCTCAGGTGACCATACCGACAGTCGCACTGGCCGGCTGACCTCATCTGGTAGCCGTCCGTCGACCGCACATAGAACTCAACCGATGAATGAGACCAAACAGCCAACTTATACGCGCTCCGGATCTACTAGAGGCAATCGTGATGATGCTTTGCGGAGTTTTGAACTCCTCTCTATCAGGAAGTAA 1392 0.4483 MDHVIAGKFKLGRKIGSGSFGELYIAVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGVPHLKWFGVEGEYNVMAIDLLGPSLEDLFNYCNRKLTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKFRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMTTSIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQISGSSSRGRHDSGKAAMNAGPSVQRPEKLSVGKELRERFTGAVEAFSRRNPTSSSPRGEHSIHRSFEDVAAMHKDAYHDQDKGRNLGRHGSSSRRPIISSSTKPSSSGDHTDSRTGRLTSSGSRPSTAHRTQPMNETKQPTYTRSGSTRGNRDDALRSFELLSIRK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03141 463 FunFam Putative Casein kinase I 1 85 - -
Mepo3g03141 463 CDD STKc_CK1_delta_epsilon 8 282 - -
Mepo3g03141 463 MobiDBLite consensus disorder prediction 389 446 - -
Mepo3g03141 463 FunFam Casein kinase 1-like protein 1 331 - -
Mepo3g03141 463 Gene3D Transferase(Phosphotransferase) domain 1 1 333 - -
Mepo3g03141 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mepo3g03141 463 MobiDBLite consensus disorder prediction 339 358 - -
Mepo3g03141 463 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mepo3g03141 463 PANTHER CASEIN KINASE-RELATED 9 420 - -
Mepo3g03141 463 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03141 463 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Mepo3g03141 463 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03141 463 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03141 463 MobiDBLite consensus disorder prediction 375 454 - -
Mepo3g03141 463 MobiDBLite consensus disorder prediction 300 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03141 Mepo-Chr3 41541457 41546451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03141 6 227 CBL-interacting serine-threonine protein kinases AT4G24400 28.821 1.69e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo3g03141 Pkinase 8.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03141 K08960 - cam:101493293 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03141 3 41541457 41546451 Mepo3g03141 3 41541457 41546451 ECH
Mepo3g03141 3 41541457 41546451 Mepo4g02763 4 36328131 36334925 PCT