Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03140 ATGGATTCAGCGAGGAGTTGGTTTCATAAGTTTCAACCGCGAGATAGACTGAGAGCTTCAACGAGGAAGAAGGATGATGGTAATGGCGGAATAGATGATGCCAATGCGGTTGTTGATGAGACAGATCTTTCCAATGTTACCAAGCAGAAGGTTGCTGCTGCTAAGCAATATATCGAGAATCATTATAAAGAACAAATGAAGAATCTTCAAGAGAGAAAAGAACGTCGAACCATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGATCAAAATAACCTACTTAAATATTTAGCAAAGAAGGAAACCGAATATATGCGTCTTCAAAGGCATAAAATGGGCGTTGAGGATTTTGAGATGTTGACTATGATTGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGCAGGGAAAAGACTACAGATCATGTATATGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTAGAACATGTCAGAGCTGAGAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCTTTCCAGGATGATGAGTATCTATATCTTATTATGGAGTATCTACCGGGAGGGGATATGATGACTCTTCTTATGAGAAAGGATACATTAACTGAAGACGAAGCCCGATTTTATGTAGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATTAAACCTGATAACTTATTACTTGATAAATATGGACACTTGAAACTATCGGACTTTGGACTATGTAAACCGTTAGACTGTAGTGTACTTGAAGAATCAGACTTTTCTAATTGCCAGAATGCAAATGGAACTGCACAAAATGATGATCGTGCATTTCCGAAACGTACACAACAAGAACAGTTGGAAAACTGGCAGAAAAATAGGAGAACACTTGCTTATTCTACCGTTGGTACACCAGATTATATTGCTCCGGAAGTTTTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAACTGGAAGTCTCACTTGAAGTTTCCCGAAGAAGCAAGGCTATCTCCGGAGGCCACAGATCTTATAAGTAAGCTTTTGTGTAATGTCAACCAAAGGTTGGGGTCAAATGGTGCGGTTGAAATAAAGTCTCATCCATTCTTTGAAGGTGTTCAATGGGAAAAGTTGTATCAAATGGAAGCTGCATTTACTCCTGAAGTCAACGACGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGTCTGACAGCCAAACACATTCATCATCAAGATCTGGTGGTCCATGGAGAAAGATGCTTTCATCTAAGGACATAAATTTTGTGGGATACACGTACAAGAACTTTGAAATTGTTAACGACTATCAAGTTCCTGGGATGGCTGAGTTGAAGAAAACCTCCAAATCGAAGAGGAAGCCATCTGTCAAGTCACTGTTTGGGTCAATGCGGTCAAGTTCTCTCAAAATTAGGGTTTCAATCGGTGCTCTTCGGTGA 1602 0.392 MDSARSWFHKFQPRDRLRASTRKKDDGNGGIDDANAVVDETDLSNVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKYLAKKETEYMRLQRHKMGVEDFEMLTMIGKGAFGEVRVCREKTTDHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLKLSDFGLCKPLDCSVLEESDFSNCQNANGTAQNDDRAFPKRTQQEQLENWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEATDLISKLLCNVNQRLGSNGAVEIKSHPFFEGVQWEKLYQMEAAFTPEVNDELDTQNFEKFEESDSQTHSSSRSGGPWRKMLSSKDINFVGYTYKNFEIVNDYQVPGMAELKKTSKSKRKPSVKSLFGSMRSSSLKIRVSIGALR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03140 533 Gene3D Phosphorylase Kinase; domain 1 118 447 - -
Mepo3g03140 533 Pfam Protein kinase C terminal domain 437 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mepo3g03140 533 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03140 533 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03140 533 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 479 - -
Mepo3g03140 533 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Mepo3g03140 533 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03140 533 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo3g03140 533 CDD MobB_NDR_LATS-like 54 115 - -
Mepo3g03140 533 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Mepo3g03140 533 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Mepo3g03140 533 CDD STKc_NDR_like 118 483 - -
Mepo3g03140 533 SUPERFAMILY Protein kinase-like (PK-like) 93 465 IPR011009 -
Mepo3g03140 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Mepo3g03140 533 Gene3D Transferase(Phosphotransferase) domain 1 204 436 - -
Mepo3g03140 533 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Mepo3g03140 533 SMART pkinase_C_6 419 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo3g03140 533 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03140 Mepo-Chr3 41530872 41541113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03140 1 529 AGC Kinase Gene Family AT2G20470 77.715 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mepo3g03140 Pkinase 1.7e-64 CL0016