Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03135 ATGAGATTTTCCTCGGTTCCGCCTGGTTTTGCATCCCTAACATCTTTTTATTTGAAAAAGGATGACAATGTTAAGTCGGACCCAATCCCCACATCGACTAAACCTGAGATGGATGACAATACTTCGTATAAACAGATTTGTGCACTACGGCCATGGATAATATCCGACCAGAGCAAGTGCAAACCTGAGGAATCTCACACAGAGCATCCTCCTATGACTAAAATGAAACCCCCTACAAAGTCTAATCTTCCAAATGGGACCAAATATGGATGTCCAAAATGCAGTAATTGTTTTAAGGTAACAGCAAGGTGGCATCCTGAGGATGCAAGAAGAGAAGTTCTGGAAGAAGCTCCTATTTTCCGTCCAACAGAAGAGGAATTCAAAGACACGCTTAACTATATCGCAAGCATACGTTCCGAAGCAGAACCTTATGGAATTTGCCGTATTGTCCCTCCTACTAGCTGGAAACCGCCATGTACTCTTGAAAAAAAGAATGTATGGGAAAACTCTGAATTTGTTGCTCAAATTCAGCGAATTGATGGGCACCAAGTTCAGTATGCACCAGAAGTTATGACTAGCTCTCATGATACTACAGAAACCAAGAGAAGAAAAGTGATGAAAGTAGCCATGGACTCTCATCTTGATAATAAAAGTACTTGCACCCCTAATAATGGGAAGCTTAAAGACTGTGACAAGGAGCCTGAACCTGGTCCTAAATTTAGTCTCAAAACTTTTAAGAAATTGGCAGATGAATTCAAGATCCAGTACTTCAACCATAAGGATGAGAATAAGATTATGGGTTCTGGTAAAAATTCAGCCAGACATCAACAGCAATGGGAGCCATCTGTTGAGAATATTGAGGATGAATACGGACGAATTGCTCAAAATCCAACTGAAGAAATTGAGGTTCTCGGCGGTGACACTTTGGAGGCTGGAGATTTTAGCAGTGGATTTCCAATTCCAGCGATTTCCGATTCTCTGAATGCATGCACTTATCCTGAATATTTGAAATCTGGATGGAACTTGAATAATATGCTTTCACTCCCAGGTTCCCTTCTTTCCTTTGAAAGCCCTGAAGCTGCGCAGAAATTTTCCCCTAGGGTACATGTGGGAATGTGCTTTTCACCACTCAAATGGAAAGTTGAAGAGCACCAATTATACTCATTATATTACATGCATTTGGGTGAACCCAAAGTATGGTATGGTGTCCCAGGAAGATGTTCTGTTGACTTTGAAACAATTTGGAAGAAGTATCTCGTTGGAGCACGAGATATGTATGCAGGACAGCCAGATATGCATGATAATCTGGTTATGCAGTTATCCTGCTCAGTATTGAAGGGAGAGGGTATACCAGTGTATCGGTGTATTCAGTATCCTCGTGAGTTTGTTCTTGTCTTTCCTGGAACATATCATTCAGGATTTGATTGTGGTTTCAACTGTTCTGAGGCAGCAAGTTTTGCTCCTCTTGAGTGGTTGCTACATGGACAGAATGTTGTAGACCTATATAGTGAACAGAAGAGAAAAACTTTAATTTCATACGACAAGCTGTTACTGGGAGCAGCTAGGGAAGCTGTGAGGACCCGATGGGAAACCGATATATGTATGAAGAGCACGCCCGACAACATAACATGTAAAGATGCCTATCAAAGAAATGGGATCTTGTCAAAAGCTTTTAATTCTCGTATCAGGACTGAAAGTTTGAAGAGGAAATTTATTTCCACTTCTTTGAAGTCACAAAAGATGGATGAAAACTTTACTGCCAGTTGTAAAAGGGAATGTAGCGTATGTCTGCGTGATTTATTCCTGTCTGCTGTTGGTTGTCCGTGCTCAGATGACAAGTTTGTGTGTCTTGATCATGCAAAACAGCTTTGTTCTTGTCCTTGGACAGGCAGAATTCTCCTTTACCGTTATGAAATCAGTGAATTGGAGGTTCTTCATCAAGCTTTGGATGGAAAACTAAGTGCAGTCTATAAATGGGCCAAAGAAGATCTTGGTTTAACTGTGCGCTCAGTTGCCTCCCAGAAATCAAAACTAACCCCAGAAAAAGTAAATGATTCAAAAGACTCGGTAAAAGAATCTATATTGCAGTCGGCGCGGGATGCATATAACAAGTGGAAACAGCATAAATCGCAGGCAACACCAAATTCTTTGGTGGAGAAACAGAGCGAAATGGCCTTCCAAGCCAAGCGGACCCCTAGTAGTACTCACAGTAGTCCGTACGCCATTCACCCAAAAAAGAACACAACTTTACTTCATTCAGCAATATCAAATGAGGTCAAAGCTAAAGAGAAAATGGTGGGGCCCAAATCTGCTGCAACAAGCATTGGTAAAGGAAGTAATTCTGCTGGGATCAAACCTGATAGCAAGGCAATTGGGGATAAGCTCACAATTTCAAAGAAAGTAGGAGACCCAAAAATTTCTGAAGTTTCTTCATCAACTCCAGGCTCGCGTTTCTTGTCTTTACTACAAGAGAACATTTGGATTGATGTTTCGTCTAGTTCTTCAGAATCCGATGAGGATTAG 2523 0.4122 MRFSSVPPGFASLTSFYLKKDDNVKSDPIPTSTKPEMDDNTSYKQICALRPWIISDQSKCKPEESHTEHPPMTKMKPPTKSNLPNGTKYGCPKCSNCFKVTARWHPEDARREVLEEAPIFRPTEEEFKDTLNYIASIRSEAEPYGICRIVPPTSWKPPCTLEKKNVWENSEFVAQIQRIDGHQVQYAPEVMTSSHDTTETKRRKVMKVAMDSHLDNKSTCTPNNGKLKDCDKEPEPGPKFSLKTFKKLADEFKIQYFNHKDENKIMGSGKNSARHQQQWEPSVENIEDEYGRIAQNPTEEIEVLGGDTLEAGDFSSGFPIPAISDSLNACTYPEYLKSGWNLNNMLSLPGSLLSFESPEAAQKFSPRVHVGMCFSPLKWKVEEHQLYSLYYMHLGEPKVWYGVPGRCSVDFETIWKKYLVGARDMYAGQPDMHDNLVMQLSCSVLKGEGIPVYRCIQYPREFVLVFPGTYHSGFDCGFNCSEAASFAPLEWLLHGQNVVDLYSEQKRKTLISYDKLLLGAAREAVRTRWETDICMKSTPDNITCKDAYQRNGILSKAFNSRIRTESLKRKFISTSLKSQKMDENFTASCKRECSVCLRDLFLSAVGCPCSDDKFVCLDHAKQLCSCPWTGRILLYRYEISELEVLHQALDGKLSAVYKWAKEDLGLTVRSVASQKSKLTPEKVNDSKDSVKESILQSARDAYNKWKQHKSQATPNSLVEKQSEMAFQAKRTPSSTHSSPYAIHPKKNTTLLHSAISNEVKAKEKMVGPKSAATSIGKGSNSAGIKPDSKAIGDKLTISKKVGDPKISEVSSSTPGSRFLSLLQENIWIDVSSSSSESDED 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03135 840 Pfam JmjC domain, hydroxylase 368 486 IPR003347 -
Mepo3g03135 840 SUPERFAMILY Clavaminate synthase-like 236 529 - -
Mepo3g03135 840 ProSiteProfiles JmjN domain profile. 117 158 IPR003349 -
Mepo3g03135 840 MobiDBLite consensus disorder prediction 58 81 - -
Mepo3g03135 840 SMART JmjN_1 116 157 IPR003349 -
Mepo3g03135 840 Pfam C5HC2 zinc finger 593 643 IPR004198 -
Mepo3g03135 840 MobiDBLite consensus disorder prediction 769 789 - -
Mepo3g03135 840 Pfam jmjN domain 118 151 IPR003349 -
Mepo3g03135 840 ProSiteProfiles JmjC domain profile. 337 503 IPR003347 -
Mepo3g03135 840 PANTHER LYSINE-SPECIFIC DEMETHYLASE 111 762 - -
Mepo3g03135 840 MobiDBLite consensus disorder prediction 58 73 - -
Mepo3g03135 840 SMART cupin_9 334 503 IPR003347 -
Mepo3g03135 840 Gene3D Cupin 102 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03135 Mepo-Chr3 41447708 41454362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03135 5 700 JUMONJI Transcription Factor Family AT1G08620 44.924 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo3g03135 JmjC 7.8e-31 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03135 K11446 - gmx:100804864 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03135 3 41447708 41454362 Mepo3g03135 3 41447708 41454362 ECH