Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03118 ATGGAAGGAGAAGGAAATAAAAATACAGAAGCACGATACAGAGGAATTCGTAGGAGACCATGGGGTAAGTTTGCAGCAGAAATTCGTGACCCAACAAGAAAAGGCTCTCGCATTTGGCTTGGAACATTTGATACTGCAGAACAAGCTGCACGTGCTTATGATGTTGCTGCTTTTCATTTTCGTGGTCATAAAGCAATTCTCAACTTCCCAAATGATTTTGCTCATTCCAGTACTAATTATATTCCAAACACTACTTCAACTTCAAATTCATTAATAACCAATTCATATCGTCATGATCTACAGCAACAACAAGATGATGATACTTTTGATCAACTGGAATGCTTGGACAACAATTTATTGGAAGAACTGCTTGGTCAGGTGCAAGATGATGGTGCAGGTAGCTCTAGACGTGAATAG 417 0.3909 MEGEGNKNTEARYRGIRRRPWGKFAAEIRDPTRKGSRIWLGTFDTAEQAARAYDVAAFHFRGHKAILNFPNDFAHSSTNYIPNTTSTSNSLITNSYRHDLQQQQDDDTFDQLECLDNNLLEELLGQVQDDGAGSSRRE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03118 138 Gene3D AP2/ERF domain 11 71 IPR036955 GO:0003700|GO:0006355
Mepo3g03118 138 SMART rav1_2 12 76 IPR001471 GO:0003700|GO:0006355
Mepo3g03118 138 CDD AP2 11 72 IPR001471 GO:0003700|GO:0006355
Mepo3g03118 138 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Mepo3g03118 138 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Mepo3g03118 138 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Mepo3g03118 138 Pfam AP2 domain 12 63 IPR001471 GO:0003700|GO:0006355
Mepo3g03118 138 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Mepo3g03118 138 PANTHER DNA-BINDING DOMAIN 7 118 IPR044808 GO:0003700|GO:0009873
Mepo3g03118 138 FunFam Ethylene-responsive transcription factor 2 11 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03118 Mepo-Chr3 41274495 41274911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03118 8 124 AP2-EREBP Transcription Factor Family AT3G23230 54.622 3.49e-38 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g03118 AP2 2.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03118 - - gmx:100778998 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03118 3 41274495 41274911 Mepo3g03118 3 41274495 41274911 ECH
Mepo3g03118 3 41274495 41274911 Mepo4g02797 4 36682441 36683379 PCT