Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03113 ATGGAAGATGAGTTAAAGAAAAAGGTGAAACAAGATGAATTGCCAAAGAAAATCAAGTATAGAGGGGTGAGGATAAGGCCATGGGGAAAATTTGCAGCAGAGATTCGAGATTCGGCTAGGCATGGTGCTCGTGTTTGGCTTGGTACATTTAACACTGCTGAGGAAGCTGCAAGAGCTTATGACCGTGCGGCTTTTGATATGAGAGGTTCTTCTGCTATTCTCAATTTTCCTGATGAACATTTTCCAAGCAATGTGGCTTATAATCCTTCTAAGCCCTCTTCTTCGTCCAATTCAACTTCATCATCATCTTCAAAGGTTAAATCAAAGCTTGGTGAACAAGTTATAGAGTTTGAGTATTTGGATGAAAAATTGTTAGAGGAACTCTTGGATTTTGAGAGTATCATCAACCAGGACTTGTTCAAGTAG 426 0.3967 MEDELKKKVKQDELPKKIKYRGVRIRPWGKFAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFDMRGSSAILNFPDEHFPSNVAYNPSKPSSSSNSTSSSSSKVKSKLGEQVIEFEYLDEKLLEELLDFESIINQDLFK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03113 141 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Mepo3g03113 141 MobiDBLite consensus disorder prediction 86 109 - -
Mepo3g03113 141 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Mepo3g03113 141 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Mepo3g03113 141 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Mepo3g03113 141 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Mepo3g03113 141 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Mepo3g03113 141 FunFam Ethylene-responsive transcription factor 2 19 79 - -
Mepo3g03113 141 PANTHER DNA-BINDING DOMAIN 12 130 IPR044808 GO:0003700|GO:0009873
Mepo3g03113 141 MobiDBLite consensus disorder prediction 84 109 - -
Mepo3g03113 141 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Mepo3g03113 141 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03113 Mepo-Chr3 41241331 41241773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03113 16 132 AP2-EREBP Transcription Factor Family AT3G23230 62.500 1.32e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g03113 AP2 4.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03113 - - cam:101512924 171.4