Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03109 ATGGTTAACAACTTGCATCAACTACTTAGAAGTCTTTGTTTCAATACTCAGTGGAATTATGCAATCTTTTGGAAGCTCAAACATTGTGCTCCAATGATCTTGACATTGGAGGATGCTTACTATGACAATTCGGATTATTTTGACGCTTCAGAAAATAAGTACTGTCAGAAGACCTTAGAACAGATTGAGGGTGGGAAATTTTCACATGACGCTTTGGGGTTAGCTGTTGCAAAGATGTCATATAATGCATATCCATTAGGGCAAGGTATTGTTGGACAGGTGGCTGTTACTGGAAAGCATCAGTGGATCTGTGCAGATAATAATCAAGTTACAAGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAATATCAATTTTCTGCTGGAATTAGGACAATTGTTGTGTCTGCAGTCCCACTAGGCGTTGTTCAGCTTGGCTCTCTAATAAAAGTGAATGAAGATATGGGAGTTGTTAATCATATAAGAAATCTGTTTTTGTCTACTCAAGATTACTCAATAGACCACATTCCCAGTCAAATACAAAGTAATTTGAAGAGCTCTTCATCTCAGCCGGATGTCTTGAAGGAAAAATCATCTTCAGATATTATGCCTGCGTGCATGAGGAATAAAACAGTGGATGTTTTGACGCCCCTTCAATGTTCTGGGAGGAACAACACAGCTCATTCTGCTTATTGGGAAATGGGTGATAATATGGTCAAGCATGAAGGGGCCGAGCTCTATAGTGATGTGAGTCCCATTTTGCTTCAGTCAATGTCTGATATGATTAATGTGGAGCATCAGGAATTTGGAGAGATAAGACCTATAAACGCGAGGGAGTGTGAAGGGGGCAGTAGTGGCTGCAAAAATATGATATTGGACTCGGAACAAAATCACTTGTCATTTTTAAACAATTCTGCTATAAATAATGTTGATGTCTATGATTTAATACACCAATCGGAAAAGGATTCCTCATACACACCGTTGAAGTTTCCGGCTGGATGTGAACTACTTGAAGCACTTGGACCATCTTCTTTGAAAGGGAGTAAATATTTTGATTGGTTGACACAAGTTAATCAAGATATGAAAACTGTGGATGTGCCGGATGTGTTTAACACTAGTCAGTTGACTTCTGAATCTCATCCAGAGCATCTTTTGGAAGCAATGGTGGCCAATATCTGTCACAGTAGTAATAATGAGGTTAATAGTGAATTATCATTTTGTAGATCAATGCAATCTGTATTGAGTTCTGGAAAAACAACTGATGCTTCTATTCAAGATGTGCACGCAATAGATCATCCTTCTCTTGTCAGAGAGGACAAAAACCATTGTTTGAGTTCATCATCTAAAGTTGTTTCTTCCACATGTCCTAGTGCTTGTAGTGAACAATTTGAAAGATCTTCTGAACCATCTAAAAACAGCAAGAAGAGGGCTAGGCCCGGGGAAAGTTGTAGACCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTTAGAGAGTTGGTACCAAACGGAGCTAAGTGTAGTATTGATTCACTACTGGAGCGTTCGATAAAGCACATGCTCTTTCTGCAAAGCATAACTAATCATGCCGACAAGCTAACTAAACTTGCTGATACTAAATCAAAGTTGCATCATATGGAAACAGACATTCTTGGATCCTCTAGTTCTGAGCAGGGTTCAAGTTGGGCAGTTGAGGTAGGGGGTCATCTGAAAGTTCATTCCATATTAGTGGAGAATCTTAGCAACAACGGACAGATGCTTATTGAGACGCTATGTGAAGAGAGCAGCCATTTTCTTGAAATAGCAGAAGCTGTAAGAAGCTTGGGGCTTACAATTTTGAAGGGTGCAACAAAAGCTCGTGATAAGAAGATATCGATATGCTTTATCGTTGAGGGTGAAAGGAACAGAAATGTACACAGATTGGACATCTTGTGGCCACTTGTTCAGATACTACAATCCAAGAGTGTTGTGTGTCAACAGTAA 1995 0.3985 MVNNLHQLLRSLCFNTQWNYAIFWKLKHCAPMILTLEDAYYDNSDYFDASENKYCQKTLEQIEGGKFSHDALGLAVAKMSYNAYPLGQGIVGQVAVTGKHQWICADNNQVTSSGLSFEFADGWQYQFSAGIRTIVVSAVPLGVVQLGSLIKVNEDMGVVNHIRNLFLSTQDYSIDHIPSQIQSNLKSSSSQPDVLKEKSSSDIMPACMRNKTVDVLTPLQCSGRNNTAHSAYWEMGDNMVKHEGAELYSDVSPILLQSMSDMINVEHQEFGEIRPINARECEGGSSGCKNMILDSEQNHLSFLNNSAINNVDVYDLIHQSEKDSSYTPLKFPAGCELLEALGPSSLKGSKYFDWLTQVNQDMKTVDVPDVFNTSQLTSESHPEHLLEAMVANICHSSNNEVNSELSFCRSMQSVLSSGKTTDASIQDVHAIDHPSLVREDKNHCLSSSSKVVSSTCPSACSEQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQSITNHADKLTKLADTKSKLHHMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSNNGQMLIETLCEESSHFLEIAEAVRSLGLTILKGATKARDKKISICFIVEGERNRNVHRLDILWPLVQILQSKSVVCQQ 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03109 664 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 660 IPR043561 GO:0003700|GO:0006355
Mepo3g03109 664 MobiDBLite consensus disorder prediction 462 491 - -
Mepo3g03109 664 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 478 527 IPR011598 GO:0046983
Mepo3g03109 664 MobiDBLite consensus disorder prediction 468 491 - -
Mepo3g03109 664 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03109 Mepo-Chr3 41205486 41212064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03109 6 659 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.672 2.39e-138 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03109 - - mtr:25499239 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03109 3 41205486 41212064 Mepo3g03109 3 41205486 41212064 ECH
Mepo3g03109 3 41205486 41212064 Mepo4g02815 4 36942968 36948829 PCT