Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03107 ATGGTGATAAATGATTATGATTTGCACAAGAGAGCTAGAAACAACCAAAATTTTAAGGCCATGATGACTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGGAGAAAATGTGTTAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAACAAGGTGCTACCCATTTTGCAGCTATTCACAAGGTCTTTGGTGCAAGTAATGTTTCAAAGCTCCTTGCACACCTCCCTGTGACTGATCGTTGTGAAGCTGCAGTCACAATCTCTTATGAAGCTCAAGCTAGACTTCAAGATCCAATTTATGGATGTGTTGCCCATATTTTTGCACTCCAACAACAGGTGGTCAATTTACAGGCACAGCTAGCTTTTCTGAGGGAACAAGCAGCTCAAAGGTGTCTCAATGCCCCAAATTCTGAAAACCCTAATGAGAAGAACTTTGGAAAACCTACTAACATTCTCCCTCAAGATCTTCAAAATTTGTTCCAGATGGAAAATTCCAACACGTGTTCTCAATTTCTTCCTGATTTCTCTTCTTCCACTAATCTCTCATCAACAACACAATATTATAATGGGACTACCACTACTCTCATGGATCTAAACCCTATCGGAAACTATGAAAATTCAGGAACCATATTGAAAGAAAGCTTCCCATCATTTTCTAACTTTGATGAGCGATGTAATAATTCAATGTCCTTTGACAACATGCAAAGACAGTGGACCTATCAGTAA 732 0.3948 MVINDYDLHKRARNNQNFKAMMTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVTDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAFLREQAAQRCLNAPNSENPNEKNFGKPTNILPQDLQNLFQMENSNTCSQFLPDFSSSTNLSSTTQYYNGTTTTLMDLNPIGNYENSGTILKESFPSFSNFDERCNNSMSFDNMQRQWTYQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03107 243 Coils Coil 108 128 - -
Mepo3g03107 243 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 187 - -
Mepo3g03107 243 ProSiteProfiles LOB domain profile. 27 129 IPR004883 -
Mepo3g03107 243 Pfam Lateral organ boundaries (LOB) domain 28 125 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03107 Mepo-Chr3 41187082 41188302 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03107 28 166 AS2 family AT3G58190 71.127 8.79e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g03107 LOB 1.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03107 K13945 K13944 gmx:100816960 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03107 3 41187082 41188302 Mepo3g03107 3 41187082 41188302 ECH
Mepo3g03107 3 41187082 41188302 Mepo4g02821 4 36990949 36991807 PCT