Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03105 ATGGCTTCTTCAAATGGAACTAGCTCCGGAACTGGTTCTCCTTGTGGAGCATGCAAGTTCCTTAGAAGAAAATGTGCACCTGATTGCATTTTTGCACCTTACTTTTGCTCAGAACAAGGCCCTGCAAGATTTGCAGCTATTCATAAAGTGTTTGGTGCTAGCAACGTTTCTAAGTTGCTCTTGCATATACCAGCTCATGAACGTTGTGAAGCTGTTGTCACAATTGCTTATGAGGCTCAAGCTCGTATTAGAGACCCTGTATATGGCTGTGTCTCTCACATTTTTGCCTTACAACAACAGGTAGCATGCTTGCAGGCACAATTGATGCAAGTGAAATCTCAGCTGTCACATAACATAGAGAATAATAATCAATGGACAGGAAACAGTAATAGTGTTGCTGGCACACAGCCAATGAATTATCCATTTTGTCCAACTTACATGAACCCTATATCTCCTCAAAGCTCACTTGAGTCTTCAATTGATCATAGCAGCAGCATGAATGATGGAATGATGAGCATGCAAGATGTACAAAGTAGCAGAGAAGATTTCTCATTCCAAGGTTGTAATAATTATAAGAGAAGAATGTCACATAACAATAATAATGATCATGACTTGGGTGAGTTGCAAGAAATAGCACTTAGGATGATGAGGAACTGA 657 0.4003 MASSNGTSSGTGSPCGACKFLRRKCAPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPAHERCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKSQLSHNIENNNQWTGNSNSVAGTQPMNYPFCPTYMNPISPQSSLESSIDHSSSMNDGMMSMQDVQSSREDFSFQGCNNYKRRMSHNNNNDHDLGELQEIALRMMRN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03105 218 ProSiteProfiles LOB domain profile. 13 115 IPR004883 -
Mepo3g03105 218 Coils Coil 94 114 - -
Mepo3g03105 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 208 - -
Mepo3g03105 218 Pfam Lateral organ boundaries (LOB) domain 14 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03105 Mepo-Chr3 41169963 41171406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03105 1 218 AS2 family AT2G42430 56.627 2.65e-81 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g03105 LOB 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03105 K13944 - gmx:100801508 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03105 3 41169963 41171406 Mepo3g03105 3 41169963 41171406 ECH
Mepo3g03105 3 41169963 41171406 Mepo4g02822 4 36998604 37000287 PCT