Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03099 ATGCCGGATCGACTAAGAGAGTTATTTTCTGAGAAAGGAGAAATCACTGATGTCAAACTTATGCATAACATCAGTGAGAAGGAATTAGAAGAGCTTTTCAGCCCCTTTGGTACTATCACAGAAGTTCGTTTTGTTCTTAGCCAACTCACCAAGAAATTTAATGGCATGGCTTTTGTTAGTTTCTCCAGTCCACAATCTGCAGCCAGGGCGAGCAAATCTTTAACTTGCACTACCTATAAAGGAGTATCTATGACTGTTGTACCAGCCCTACAAAGGCCTTCAAACAATGAAGAGGAGTAA 300 0.4067 MPDRLRELFSEKGEITDVKLMHNISEKELEELFSPFGTITEVRFVLSQLTKKFNGMAFVSFSSPQSAARASKSLTCTTYKGVSMTVVPALQRPSNNEEE 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03099 99 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 15 91 IPR000504 GO:0003723
Mepo3g03099 99 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 20 91 - -
Mepo3g03099 99 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 81 IPR000504 GO:0003723
Mepo3g03099 99 SMART rrm1_1 20 87 IPR000504 GO:0003723
Mepo3g03099 99 SUPERFAMILY RNA-binding domain, RBD 22 94 IPR035979 GO:0003676
Mepo3g03099 99 Gene3D - 20 99 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03099 20 94 Eukaryotic Initiation Factors Gene Family AT3G11400 36.000 1.96e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03099 - - egr:104425659 78.9517