Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03097 ATGGCTGGTGAGAGGTTTTGTAAGAATGAAGAAGACAAGGCTATGTTGGAATCTGTACTGGGTAATGAAGCTTTTGCATTTTTTAGCTCAGCTGTTTCAAAACATGTTTTTTCCGATGTTATTGTTCCGCCGAATCTTGATGTGAGTATCCACACAAGGTTGTGTCACATTGTTAAGGGATCCAAGTGGAATTACGCGATTTTGTGGCAGGTTGCTGGTTTGAAATCCGGTGGGTATGTGTTGAAATACGGTGAGGGACACTGTCAGGATCCCAAAGGGGGTCCAAGGAATGAGCAGGAAAGGGAGAAAGATGATGTTAGGAGGAAGGTTTTGGGGAAGATTCATGGTTGCTGGGGTGGATCTAGCTCAGTTGAGAATATTTATAAGAAATTGGACGGTGTTTCGGATTTGTATATGCTTTACTTGACCTCTGTCTATTATGTGTTTGGTTTTAATTCTCAGTATGGTCCTGGAAATTCTTTTAAGTGTGCTAAACCAAGTTGGTCTTCTGATGCTGGTAGTTGTTTAAATCAGTATGAATCGAGGTCGTTTCTGGCTAAATCAGCTGGTTTTCAAAGTGTTGCTTTTGTACCTCTTAAAGCCGGGGTTATAGAGCTTGGTTCGACGGAGATGGTGCCTGAAGAGCAAGGTTTTTTGGATATGGTCAGGGCAACTTTTGGAGAATCTACTTCTGGACAGGCTAAGGTAGCACCGAAGATTTTTGGGCACGAGTTAAGCTTGGGGGATACAAAATCTCAGTCGATAACTATTAGTTTCTCCCCAAAAGTGGAAGATGATTCTGGTTTCACTTCTGACTCTTACGAAGTACAAGCGCTTGGAGCAAACCATGCTTATGGTAATTCTTCCAATGGGGGTGTAGGAGACAGTAACGAGGCAAAAAAGTACCCTCAGTTGGGTCAAATGATTCCTGGGAATTTTACTTCTCAAGCAAGAGTTTCTTCAATTGATTTGGGTAATGAAGACTCCTCCTCGCCTCTTGGAGACGAGCGGAAGCCTAGAAAAAGAGGGAGAAAGCCTGCCAATGGACGAGAGGAACCACTGAATCATGTTGAAGCGGAGAGGCAAAGACGGGAGAAGCTTAACCAGAGATTTTACGCCTTAAGAGCTGTTGTTCCTAACATTTCTAAAATGGACAAGGCTTCTCTTCTTGGTGATGCTATTACCCATATCACTGATCTCCAGAAGAAGATCAAACTTATGGAAACTGAAAAAAACATGGCTGACAATAAGGGCCAGCAATTGCCATTGCAAGATATTGATTTTCAGGCTCGACAGGATGATGCAGTTGTTAGAGTTAGCTGCCCCTTGGATATCCACCCAGTTTCTGGAATTGTTAAAGTGTTCAGAGAGCATCAAATTGTAGCTCAAGAGGCCAATGTTTCAACTTCCCAGGATAAAGTAATTCATACGTTCTCCATCAGAACTCAAGGAGGGGAAGCAGCTGCTATACAGTTGAAAGAAAAGCTTGAAGCATCTCTAGCCAAAAATTAA 1512 0.4259 MAGERFCKNEEDKAMLESVLGNEAFAFFSSAVSKHVFSDVIVPPNLDVSIHTRLCHIVKGSKWNYAILWQVAGLKSGGYVLKYGEGHCQDPKGGPRNEQEREKDDVRRKVLGKIHGCWGGSSSVENIYKKLDGVSDLYMLYLTSVYYVFGFNSQYGPGNSFKCAKPSWSSDAGSCLNQYESRSFLAKSAGFQSVAFVPLKAGVIELGSTEMVPEEQGFLDMVRATFGESTSGQAKVAPKIFGHELSLGDTKSQSITISFSPKVEDDSGFTSDSYEVQALGANHAYGNSSNGGVGDSNEAKKYPQLGQMIPGNFTSQARVSSIDLGNEDSSSPLGDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITHITDLQKKIKLMETEKNMADNKGQQLPLQDIDFQARQDDAVVRVSCPLDIHPVSGIVKVFREHQIVAQEANVSTSQDKVIHTFSIRTQGGEAAAIQLKEKLEASLAKN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03097 503 Gene3D - 344 416 IPR036638 GO:0046983
Mepo3g03097 503 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 226 IPR025610 -
Mepo3g03097 503 FunFam Transcription factor bHLH13 344 418 - -
Mepo3g03097 503 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 400 IPR011598 GO:0046983
Mepo3g03097 503 Coils Coil 397 417 - -
Mepo3g03097 503 SMART finulus 357 406 IPR011598 GO:0046983
Mepo3g03097 503 PANTHER MYC 40 499 IPR045084 GO:0003700|GO:0006355
Mepo3g03097 503 Pfam Helix-loop-helix DNA-binding domain 355 401 IPR011598 GO:0046983
Mepo3g03097 503 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 422 IPR036638 GO:0046983
Mepo3g03097 503 CDD bHLH_AtAIB_like 348 411 - -
Mepo3g03097 503 MobiDBLite consensus disorder prediction 323 362 - -
Mepo3g03097 503 MobiDBLite consensus disorder prediction 330 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03097 Mepo-Chr3 41112666 41115437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03097 3 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 47.628 4.53e-160 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g03097 bHLH-MYC_N 7e-35 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03097 - - gmx:100819968 701.819