Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03092 ATGGCTTCCTCCGTTGAAGAACCCACCGTCTCCGCCGTTGAGCAACCCACTGTGGAGGAGCCGGCCGCCGTCGACCCTCTCCCCCCTATTGTCAATGAATCTGACGAGCCCACTGCCGCCAAGCCCAAGAAAGCCCCCAAAGAGCCAAAACCCAGAAAGCCCGCTTCCAAGAACCCTCGCACTCACCCTACCTATGAAGAGATGGTGACGGACGCGATTGTGACTCTTAAGGAGAAAAACGGTTCGAGCCAGTATGCTTTGGCGAAGTTCATTGAAGAGAAGCATAAGAATCTTCCAGCGAACTTCAAGAAGATTCTTCTGGTTCAGATCAAGAAGCTTGTTGCTTCTGGGAAGCTTGTTAAGGTCAAGGGATCTTACAAGTTACCAGCTAAGTCTGCTGCTCCAGCTAAGAAGCCCGCTGCTGCAAAGCCCAAGCCCAAGCCAAAGGCGAAAGCACCTGTTGCCAAGGCTCCAGCTGCTAAGTCTAAGGCGAAAGCTGCTCCTGCTAAGGCTAAGGCCAAAGCTGCACCTGCCAAGGCTAAGCCAGCTGCTAAGGCTAAGCCTGCCGCGAAGGCAAAGCCAGCTGCTAAGCCTAAGCCTGCGGCAAAGGCTAAGCCAGCTGCAAAGCCCAAGGCGAAGGCTCCTGTTGCTAAGGCCAATGCTGTACCTGTAGCTGCTAAGGCAAAGCCCGCGGCTAAGGCTAAGCCTGCTGCGAAGGCGAAACCTGCTGCAAAGGCAAAGCCAGCTGCGAGGCCTGCCAAGGCTTCAAGAACCTCGACAAGGACATCACCAGGGAAGAGAGCTGCTGCGGCGAAACCGGCTGTGAAGAAAGCTGCTACGCCAGTGAAGAAGGCTGCACCGGCGAAGAAGGCTGCTACGCCAGTGAAGAAGGCTGCACCAGCAAGGAAGGCTCCAACAAAAAGGGGGGGTAGGAAGTGA 939 0.5559 MASSVEEPTVSAVEQPTVEEPAAVDPLPPIVNESDEPTAAKPKKAPKEPKPRKPASKNPRTHPTYEEMVTDAIVTLKEKNGSSQYALAKFIEEKHKNLPANFKKILLVQIKKLVASGKLVKVKGSYKLPAKSAAPAKKPAAAKPKPKPKAKAPVAKAPAAKSKAKAAPAKAKAKAAPAKAKPAAKAKPAAKAKPAAKPKPAAKAKPAAKPKAKAPVAKANAVPVAAKAKPAAKAKPAAKAKPAAKAKPAARPAKASRTSTRTSPGKRAAAAKPAVKKAATPVKKAAPAKKAATPVKKAAPARKAPTKRGGRK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03092 312 MobiDBLite consensus disorder prediction 125 312 - -
Mepo3g03092 312 CDD H15 59 128 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo3g03092 312 Pfam linker histone H1 and H5 family 62 128 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo3g03092 312 PANTHER HISTONE H1 37 288 - -
Mepo3g03092 312 FunFam Histone H1 56 142 - -
Mepo3g03092 312 SUPERFAMILY "Winged helix" DNA-binding domain 58 141 IPR036390 -
Mepo3g03092 312 Gene3D - 56 147 IPR036388 -
Mepo3g03092 312 MobiDBLite consensus disorder prediction 37 55 - -
Mepo3g03092 312 PRINTS Histone H5 signature 157 171 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo3g03092 312 PRINTS Histone H5 signature 75 92 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo3g03092 312 PRINTS Histone H5 signature 193 210 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo3g03092 312 PRINTS Histone H5 signature 48 69 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Mepo3g03092 312 SMART h15plus2 59 125 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo3g03092 312 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 61 130 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mepo3g03092 312 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03092 Mepo-Chr3 41077748 41079446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03092 56 129 Single Myb Histone (SMH) Gene Family AT1G72740 33.784 4.68e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03092 K11275 - tpra:123889087 171.014