Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g03075 | ATGGAATCACACGGCGGAGGACCACTTCGTTCCCGGAGTTCCCAATCCGCCTCCCCTTCCCACTCCGCCTCCGCTTCCGCCACCTCATCCATCCACAAACGCAAACTCGTCTCCGAAGATCACGCGCCACCGTTCGCTCCTTCTTCCTTATCCGCCGACACACGCGACGGCGCCTTAACCTCCAATGACGACCTCGAAAGCATCTCCGCTCGCGGCAACGACTCTGATTCCGACGACGACTCTGAAGATGCAGTTGTCGACGACGACGAAGACGAGTACGATAATGACAACGGTTCCTCCATGCGGAATTTCACTGCTGCTAGGCTTAACAATGCTCCTTCCGCTCCTCGCAATACGAAGATCAAAACTGAAAATTCAACTGTTAAGATCGAACAATCTGATGGAGCTAAAGATGCTGGACCTCCTGTCACCGGTGCCGGTGCTGGTGGTGGTTCTGTTCCCGGCATTGTGGTTAAGGAGGATGCGACGAAGATATTCACTGAAAATTTGCAGACTAGTGGTGCTTATAGTGCCAGGGAAGAGAGTCTCAAGAAAGAGGAAGAAACTGGAAAGCTCAAATTTACATGCCTGTCAAATGATGGTGTTGACCAGCATATGGTTTGGTTGATAGGATTGAAGAATATATTCGCTAGACAACTTCCCAATATGCCCAAGGAGTACATTGTCCGGCTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGTAATCACGTTGTTGGAGGCATTACATATCGTCCATATGCAAGCCAGAGGTTTGGTGAGATAGCCTTTTGTGCAATTACGGCTGATGAGCAAGTAAAAGGGTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCTCGTGATGTAGATGGGCTGACACATTTTCTCACATATGCCGACAATAATGCTGTTGGATATTTCATCAAACAGGGATTTACTAAAGAGATTCACTTGGAGAAAGATCGATGGCATGGTTACATAAAGGATTATGATGGGGGAATTCTCATGGAATGTAAGATTGATCCGAAGCTTCCTTACACTGATTTATCAACTATGATCCGTCGTCAAAGACAGGCAATAGATGAAAAGATTAGAGAATTGTCTAATTGTCACATTGTTTATCCTGGAATCGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAGAAAATTATTGAAGACATCCCTGGTTTAAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCGCGGTTCAGAACTTTAGGCGGTTCTACCGACATTGCTACAAATCTAAAACATTTAACCGCGTTTATGCGTACACTTCTAAAGACGATGCATGATCACGCTGATGCTTGGCCATTCAAGGAACCTGTTGATGCACGAGATGTTCCTGATTATTATGAAATCATCAAAGATCCAATGGATCTGAAGACAATGAGTAAGAGGGTGGAGTCAGAGGTATATTATGTCACATTTGAGATGTTTGTTGAGGATGTCAAAAGAATGTTTTCGAATGCACGGACCTATAATTCTCCAGAAACAATATATTACAAATGTGCTACAAGGCTAGAAGCGCACTTTCAAAGCAAAGTGCATTCGATTCTCCAGTCCGGCAACAAAGTTCAGTAG | 1626 | 0.4465 | MESHGGGPLRSRSSQSASPSHSASASATSSIHKRKLVSEDHAPPFAPSSLSADTRDGALTSNDDLESISARGNDSDSDDDSEDAVVDDDEDEYDNDNGSSMRNFTAARLNNAPSAPRNTKIKTENSTVKIEQSDGAKDAGPPVTGAGAGGGSVPGIVVKEDATKIFTENLQTSGAYSAREESLKKEEETGKLKFTCLSNDGVDQHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQRFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWHGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGIDFQKKEAGIPKKIIEDIPGLREAGWTPDQWGHSRFRTLGGSTDIATNLKHLTAFMRTLLKTMHDHADAWPFKEPVDARDVPDYYEIIKDPMDLKTMSKRVESEVYYVTFEMFVEDVKRMFSNARTYNSPETIYYKCATRLEAHFQSKVHSILQSGNKVQ | 541 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g03075 | 541 | MobiDBLite | consensus disorder prediction | 98 | 132 | - | - | |
| Mepo3g03075 | 541 | Gene3D | - | 188 | 352 | - | - | |
| Mepo3g03075 | 541 | ProSiteProfiles | Bromodomain profile. | 445 | 516 | IPR001487 | GO:0005515 | |
| Mepo3g03075 | 541 | ProSitePatterns | Bromodomain signature. | 450 | 508 | IPR018359 | - | |
| Mepo3g03075 | 541 | SUPERFAMILY | Bromodomain | 413 | 535 | IPR036427 | GO:0005515 | |
| Mepo3g03075 | 541 | PRINTS | Bromodomain signature | 448 | 461 | IPR001487 | GO:0005515 | |
| Mepo3g03075 | 541 | PRINTS | Bromodomain signature | 497 | 516 | IPR001487 | GO:0005515 | |
| Mepo3g03075 | 541 | PRINTS | Bromodomain signature | 478 | 496 | IPR001487 | GO:0005515 | |
| Mepo3g03075 | 541 | PRINTS | Bromodomain signature | 462 | 478 | IPR001487 | GO:0005515 | |
| Mepo3g03075 | 541 | Pfam | Acetyltransferase (GNAT) family | 239 | 317 | IPR000182 | GO:0016747 | |
| Mepo3g03075 | 541 | MobiDBLite | consensus disorder prediction | 1 | 152 | - | - | |
| Mepo3g03075 | 541 | CDD | Bromo_gcn5_like | 433 | 530 | - | - | |
| Mepo3g03075 | 541 | MobiDBLite | consensus disorder prediction | 53 | 68 | - | - | |
| Mepo3g03075 | 541 | FunFam | Histone acetyltransferase KAT2A | 189 | 353 | - | - | |
| Mepo3g03075 | 541 | Pfam | Bromodomain | 437 | 520 | IPR001487 | GO:0005515 | |
| Mepo3g03075 | 541 | CDD | NAT_SF | 239 | 293 | - | - | |
| Mepo3g03075 | 541 | MobiDBLite | consensus disorder prediction | 8 | 32 | - | - | |
| Mepo3g03075 | 541 | Gene3D | - | 424 | 541 | IPR036427 | GO:0005515 | |
| Mepo3g03075 | 541 | PANTHER | GH11602P | 24 | 538 | IPR037800 | GO:0004402 | |
| Mepo3g03075 | 541 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 200 | 351 | IPR016181 | - | |
| Mepo3g03075 | 541 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 192 | 346 | IPR000182 | GO:0016747 | |
| Mepo3g03075 | 541 | SMART | bromo_6 | 426 | 535 | IPR001487 | GO:0005515 | |
| Mepo3g03075 | 541 | MobiDBLite | consensus disorder prediction | 76 | 95 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo3g03075 | Mepo-Chr3 | 40928794 | 40939109 | Dispersed/Transposed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | GNAT | Mepo3g03075 | Bromodomain | 5.3e-22 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g03075 | K06062 | - | gmx:100813942 | 916.376 |