Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03069 ATGAGTCTGGATAAGCATCCTTGTGTATATTTTGATGTATCAGTTGACGGGGATCCTGTTGAAAGAATTGTTATTGAGCTTTTTTCTAGCGTAGTTCCTAAGACGGCCGAGAATTTTCGGGCTCTTTGTACAGGTGAAAAGGGGATTGGCGAAGCAACTGGGAAACCCTTGCATTATAAAGGAACATCTTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGCACCGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATTTCAAACTAAAACATGATGGACCTGGTGTCCTTTCTATGGCTAATAGTGGGCCTAACACCAATGGATCTCAGTTTTTTATTATATTCAAGCGCCAGCATCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTGACCAAGGGAATAGAGATTCTGAAGAAAATGGAGCAGTTGGGAACGGCGGATGGGAAACCTACCCAGCCAATTAAAATTGTTGATTGTGGTGAAGTCTCTAAAGCAAAAAGCCAGCATGCAGTTGAGAAGGAGAAAGAGAAAAGGAAAAAGTCAACAAAATCCTTAACTTCTGATGATAGTTCTGATGCTGACAAAAAATTAAGTAGAAAACGAAAAACATCTTCCAAAGACAGGAGGAAGAGGAGGAAATACTTATCATCTGATAGTGACAGTGACAGTTATTCCCCAGATTCTGAATCAGATTCATCGTATTCTGATTCAAGTTCTTCTAGCTATGAGAAGCACAAGAAAAGGAAGAGAAGTAAACGCAGGCACGGGAAGAAGAAAAGTATTGGACGGAAGCAGAGAAGCAAGCACAGTCGTAGAAGATCAAGACACCAGTCCAAAAGGAGTTCTGAAGGTTCAAGTGATACAGAAAGCGACAGTTCTAGTGCCAGTGATAAGAAATCTGGTCATAAAAAACAAGCTGACGACAAAGCTGAAAAAATTCTAGACATAGGAGATAAGTCTTCTAGCCTTCGCTTACAAAGTCCAACCAGTCCAGAACTAGCGGTGGATCCCAAGGTTAGAACGACAGTAGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGTGAATTTCTGAATAATGGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAATCAACGAGCTTATTCAGATGATTCAAATCACAACAGAGATGCGAGCCCTGGAAGAGGTCCTGCTAGGAGTCCTACCAAGAATTCTGGGGAGCTGAACCAAGGACGTGCTCTATTGGCTAGTCCTGACCATAAAGCATCTGAACCTGCTGCCTCCAAACATGGCCAGGGCATTTCAAAAAGCCCTTCGCCAAATGGTATGCCAAAGCGCGTTAAAAAAGGTCGAGGCTTTACTGAGCGTTTTGCCTTTGCACGCAGATATCGTACTCCATCTCCAGAGCGGTCCCCTCGTGCATATCGTTATGGGGATAGAAATGTTAGAAGGAACTTTGATAGAAATACAAGCTACAGAAATTATTCTGAGCGCTCACCACCACCACGTTTTCGAAGCCCACCAAGGGGCAGCCGTCCCAGATACCAAAGCAGAAGAAGTCGTAGTAGGAGCATCTCCCGCAGTCCAGTACGAGGCCGTTATAGAGACAATGGTCGTGGCCGGAGTCCAATACGCAGTGTTAGCCCAGAAGGCAGGCGACCTCCCATAAGTGACAGATTAAAATCCCGACTTGGTGCACGAGACAGTCAACAATCTCCAAACAGAAAGAGGTCGAAGTCAAACTCAAGGAGCAATGGCTCTTCTCGTTCCAGATCCCCTGACGCTACACCCCCAAAGCGTTATAATAAAAGGACCTCTGTATCTCGTAGCAGGTCTAGATCTAGCTCTGCATCCGGGCAAAAGGGTTTGGTTTCCTATGGAGATGCTAGTCCAGATTCTGGGTCTAGGTAG 1947 0.4391 MSLDKHPCVYFDVSVDGDPVERIVIELFSSVVPKTAENFRALCTGEKGIGEATGKPLHYKGTSFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLKHDGPGVLSMANSGPNTNGSQFFIIFKRQHHLDGKHVVFGKVTKGIEILKKMEQLGTADGKPTQPIKIVDCGEVSKAKSQHAVEKEKEKRKKSTKSLTSDDSSDADKKLSRKRKTSSKDRRKRRKYLSSDSDSDSYSPDSESDSSYSDSSSSSYEKHKKRKRSKRRHGKKKSIGRKQRSKHSRRRSRHQSKRSSEGSSDTESDSSSASDKKSGHKKQADDKAEKILDIGDKSSSLRLQSPTSPELAVDPKVRTTVDKQSHEEGELSPENGEFLNNGHDTQAEFSKPANQRAYSDDSNHNRDASPGRGPARSPTKNSGELNQGRALLASPDHKASEPAASKHGQGISKSPSPNGMPKRVKKGRGFTERFAFARRYRTPSPERSPRAYRYGDRNVRRNFDRNTSYRNYSERSPPPRFRSPPRGSRPRYQSRRSRSRSISRSPVRGRYRDNGRGRSPIRSVSPEGRRPPISDRLKSRLGARDSQQSPNRKRSKSNSRSNGSSRSRSPDATPPKRYNKRTSVSRSRSRSSSASGQKGLVSYGDASPDSGSR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03069 648 CDD cyclophilin_ABH_like 7 173 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 524 540 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 232 252 - -
Mepo3g03069 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Mepo3g03069 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Mepo3g03069 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Mepo3g03069 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Mepo3g03069 648 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Mepo3g03069 648 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Mepo3g03069 648 MobiDBLite consensus disorder prediction 564 586 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 178 648 - -
Mepo3g03069 648 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 175 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 587 635 - -
Mepo3g03069 648 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 173 IPR002130 GO:0000413|GO:0003755
Mepo3g03069 648 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Mepo3g03069 648 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 178 213 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 257 291 - -
Mepo3g03069 648 SUPERFAMILY Cyclophilin-like 5 175 IPR029000 -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 373 394 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 460 503 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 351 368 - -
Mepo3g03069 648 MobiDBLite consensus disorder prediction 292 331 - -
Mepo3g03069 648 Gene3D - 1 182 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03069 Mepo-Chr3 40834857 40841272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03069 25 171 U-box Gene Family AT5G67530 48.322 3.73e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03069 K09566 - gmx:100791082 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03069 3 40834857 40841272 Mepo3g03069 3 40834857 40841272 ECH