Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo3g03067 | ATGTCTAATAATCATAATCTACAATATGATGGTACCTCATTTATCATTGACATCACCAATACCCTCACCAAAGTCACTTCCAAATACACCAATGCAAAAAGAAGGTGGCGTTTTGCATACACAGCTATTTATTCTAGAAGGGTTATGCTTTCCCTTGCAAAAGAGGTTATATCTAGAAAAAATTCTAACCCCTACACAAAACTCTTTCATACAGAATCTTCAAGTTCTACCACCACTCTTGATATAATTGAACCACTAATTGGACAACATAATGGAACCAATCATTACTCTTTGGTTTCTGATGTTGTTGATAAAACCAAACTTGCTGATATGGTTAAGGACAAAAACTTGAAGTCCTTAACTGAGTTTGGAGGAGTTGAAGGTGTTGGACATCTTCTTGGAACATTTCCAACGGGAATCATTGGAAGTGACGATGATATTTCGAGACGGATCGAGTTGTTCGGTTCAAATACTTACAAAAAGCCACCACCAAAAGGTCTTTTACATTTTGTGCTTGAAGCTTTCAATGATACAACAATTATCATTCTTCTTGTTTGTGCTGGTCTTTCCCTTGGTTTTGGTATAAAAGAACATGGACCAGGGGAAGGTTGGTATGAAGGTGGAAGTATATTTCTAGCAGTTTTTCTTGTTGTGGTTGTAAGTGCACTAAGCAATTTTAGACAAGAAAGACAATTTCACAAATTGTCTAAGATAAGCAACAATATCAAAGTTGAAGTTGTGAGAAATGGAAGGCCACAACAGATATCAATTTTTGATGTTCTTGTGGGAGATATTGTGTCTCTCAAGATTGGTGATCAAATTCCAGCTGATGGAGTATTTTTATCTGGTTATTCGTTGCAAGTGGACGAATCTAGCATGACAGGTGAGAGCGACCATGTAGAGATTGAGCCTTTAAGAGCTCCTTTTTTGTTGTCCGGCGCAAAAGTTGTGGATGGATATGCTCAGATGCTAGTAACATCTGTGGGAAAAAACACATCATGGGGACAAATGATGAGCTCGATATCGCGAGACACTAACGAAAGAACGCCGTTACAAGCACGCCTCGACAAGTTAACCTCTTCAATCGGAAAGGTTGGACTTGCAGTAGCGTTTCTTGTTCTTCTAGTGTTGTTAATTCGTTATTTCACCGGTAACTCACATGATGATAAAGGGAATAAGGAATTTCGAGGAAGCAAAACCGATATAAACGATGTTATGAATTCTGTTGTGAGTATCATTGCGGCTGCAGTCACTATTGTGGTCGTTGCCATCCCTGAGGGTTTGCCATTGGCTGTGACACTCACTCTTGCTTACTCCATGAAGAGAATGATGGCAGATCATGCTATGGTGAGGAAACTTTCAGCTTGTGAAACTATGGGATCAGCAACAGTTATCTGCACTGATAAAACAGGTACCTTGACATTGAATCAAATGAGGGTGACCAAGTTTTGTCTTGGTCTTGAAAATATTAAGGAAAACTTTTCCAATGCTATGGCACCAAAAGTTCTTGAGTTGTTCCATCAAGGGGTAGGACTCAACACAACTGGTAGTGTCTATAAGCCTCCATCAGGATCTGAACCTGAAATTTCAGGGAGTCCAACGGAGAAAGCTATACTCATGTGGGCAGTATTGGATTTAGGTATGGACATGGATGAAATGAAACAGAAGCATAAAGTCCTTCATGTTGAAACATTTAACTCGGAGAAGAAACGAAGCGGTGTTGCTATAAGGAAAGAGAACGACGACAACAGTGTTCATGTGCATTGGAAAGGAGCTGCAGAGATGATACTTGCAATGTGTACAAACTATATTGATAGTAATGGCGCGAGGAAGTCCCTTGACGAAGAAGAACGGAGTAAAATTGAGAGAATCATTCAAGGTATGGCTGCTAGTAGTTTAAGATGTATTGCATTTGCTCACACGGAGATTTCAGATTCCGAAGATATTGATTATATGATCAAAAGGGAGAAAAAAACACATCAAATGCTTAGAGAAGATGGATTGACATTGCTTGGCATTGTTGGCCTCAAGGATCCTTGCAGACCAAACACTAAGAAAGCTGTGGAAACTTGCAAAGCTGCAGGAGTTGAAATTAAGATGATCACCGGCGATAACATATTCACTGCTAAGGCAATTGCAACAGAATGTGGAATATTAGATTCTAATAATGATCATGAAATTGCTGGAGAAGTGGTGGAAGGTGTTGAATTCAGAAACTATACAGAGGAAGAGAGAATGGAAAAAGTCGATAAGATCCGAGTAATGGCAAGATCATCCCCTATGGACAAACTTTTGATGGTGCAATGCTTAAGAAAGAAAGGTCATGTAGTTGCGGTCACAGGCGACGGCACAAACGATGCACCTGCCTTAAAAGAAGCTGATATAGGACTTTCTATGGGAATCCAAGGAACCGAAGTCGCCAAAGAAAGTTCCGATATCGTCATCTTAGACGACAACTTCAATTCTGTTGCAACTGTTTTAAGGTGGGGAAGATGTGTTTACAACAATATCCAGAAATTTATTCAGTTTCAACTAACAGTGAATGTAGCAGCACTTGTGATAAACTTTATTGCAGCAGTTTCTTCTGGTGATGTTCCCTTAACAACAGTTCAACTTCTTTGGGTGAATCTCATTATGGATACACTAGGTGCTTTGGCACTAGCAACAGAAAGGCCTACAAAGGAGTTAATGAAGAAAAAGCCAATAGGTCGAACCGCGCCTCTTATTACAAACATTATGTGGAGAAACCTTCTAGCTCAAGCTTCATATCAGATTGCAGTTCTTCTGATTATGCAGTTTTATGGAAAATCAATCTTCAATGTAAGTAAGGAGGTAAAGGATACACTAATTTTTAATACTTTTGTTCTCTGCCAAGTTTTCAACGAATTCAACTCAAGAAGCATGGAGAAACTATATGTATTTGAAGGGATTCTTAAAAACCACTTGTTTCTTGGAATTATTGGGATTACTATTGTTCTTCAAATCTTGATGGTGGAACTGCTAAGGAAGTTTGCTGATACAGAAAGATTAACATGGGAGCAATGGGGAATTTGTATTGGAATTGCAGTTGTTTCATGGCCACTTGCTTGCTTAGTAAAGCTCATACCCGTTTCAGATAAACCTTCCTTCAGTTATACTAAGTGGGTTAAATTATTAGTCTTCAAGATTAAGAATGCTTTTTAA | 3183 | 0.3886 | MSNNHNLQYDGTSFIIDITNTLTKVTSKYTNAKRRWRFAYTAIYSRRVMLSLAKEVISRKNSNPYTKLFHTESSSSTTTLDIIEPLIGQHNGTNHYSLVSDVVDKTKLADMVKDKNLKSLTEFGGVEGVGHLLGTFPTGIIGSDDDISRRIELFGSNTYKKPPPKGLLHFVLEAFNDTTIIILLVCAGLSLGFGIKEHGPGEGWYEGGSIFLAVFLVVVVSALSNFRQERQFHKLSKISNNIKVEVVRNGRPQQISIFDVLVGDIVSLKIGDQIPADGVFLSGYSLQVDESSMTGESDHVEIEPLRAPFLLSGAKVVDGYAQMLVTSVGKNTSWGQMMSSISRDTNERTPLQARLDKLTSSIGKVGLAVAFLVLLVLLIRYFTGNSHDDKGNKEFRGSKTDINDVMNSVVSIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADHAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFCLGLENIKENFSNAMAPKVLELFHQGVGLNTTGSVYKPPSGSEPEISGSPTEKAILMWAVLDLGMDMDEMKQKHKVLHVETFNSEKKRSGVAIRKENDDNSVHVHWKGAAEMILAMCTNYIDSNGARKSLDEEERSKIERIIQGMAASSLRCIAFAHTEISDSEDIDYMIKREKKTHQMLREDGLTLLGIVGLKDPCRPNTKKAVETCKAAGVEIKMITGDNIFTAKAIATECGILDSNNDHEIAGEVVEGVEFRNYTEEERMEKVDKIRVMARSSPMDKLLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMKKKPIGRTAPLITNIMWRNLLAQASYQIAVLLIMQFYGKSIFNVSKEVKDTLIFNTFVLCQVFNEFNSRSMEKLYVFEGILKNHLFLGIIGITIVLQILMVELLRKFADTERLTWEQWGICIGIAVVSWPLACLVKLIPVSDKPSFSYTKWVKLLVFKIKNAF | 1060 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo3g03067 | 1060 | Pfam | haloacid dehalogenase-like hydrolase | 464 | 794 | - | - | |
Mepo3g03067 | 1060 | Gene3D | - | 173 | 1034 | - | - | |
Mepo3g03067 | 1060 | Pfam | Cation transporter/ATPase, N-terminus | 125 | 190 | IPR004014 | - | |
Mepo3g03067 | 1060 | Gene3D | - | 476 | 679 | IPR023299 | GO:0000166 | |
Mepo3g03067 | 1060 | SUPERFAMILY | Calcium ATPase, transduction domain A | 241 | 340 | IPR008250 | - | |
Mepo3g03067 | 1060 | SUPERFAMILY | HAD-like | 464 | 885 | IPR036412 | - | |
Mepo3g03067 | 1060 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 124 | 1038 | IPR023298 | - | |
Mepo3g03067 | 1060 | PANTHER | CATION TRANSPORTING ATPASE | 101 | 1038 | - | - | |
Mepo3g03067 | 1060 | Pfam | E1-E2 ATPase | 242 | 444 | - | - | |
Mepo3g03067 | 1060 | SFLD | Haloacid Dehalogenase | 448 | 833 | - | - | |
Mepo3g03067 | 1060 | SMART | Cation_ATPase_N_a_2 | 122 | 195 | IPR004014 | - | |
Mepo3g03067 | 1060 | Gene3D | - | 463 | 825 | IPR023214 | - | |
Mepo3g03067 | 1060 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 472 | 683 | IPR023299 | GO:0000166 | |
Mepo3g03067 | 1060 | PRINTS | Sodium/potassium-transporting ATPase signature | 459 | 480 | - | - | |
Mepo3g03067 | 1060 | PRINTS | Sodium/potassium-transporting ATPase signature | 210 | 230 | - | - | |
Mepo3g03067 | 1060 | PRINTS | Sodium/potassium-transporting ATPase signature | 587 | 605 | - | - | |
Mepo3g03067 | 1060 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 106 | 1037 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Mepo3g03067 | 1060 | FunFam | Calcium-transporting ATPase | 674 | 825 | - | - | |
Mepo3g03067 | 1060 | FunFam | Calcium-transporting ATPase | 476 | 679 | - | - | |
Mepo3g03067 | 1060 | FunFam | Calcium-transporting ATPase | 797 | 1039 | - | - | |
Mepo3g03067 | 1060 | SFLD | p-type atpase | 448 | 833 | IPR044492 | - | |
Mepo3g03067 | 1060 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 468 | 474 | IPR018303 | - | |
Mepo3g03067 | 1060 | NCBIfam | HAD-IC family P-type ATPase | 408 | 493 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Mepo3g03067 | 1060 | NCBIfam | HAD-IC family P-type ATPase | 751 | 860 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Mepo3g03067 | 1060 | NCBIfam | HAD-IC family P-type ATPase | 210 | 383 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Mepo3g03067 | 1060 | FunFam | Calcium-transporting ATPase | 218 | 342 | - | - | |
Mepo3g03067 | 1060 | Pfam | Cation transporting ATPase, C-terminus | 865 | 1035 | IPR006068 | - | |
Mepo3g03067 | 1060 | Gene3D | - | 143 | 342 | - | - | |
Mepo3g03067 | 1060 | CDD | P-type_ATPase_Ca_PMCA-like | 147 | 913 | - | - | |
Mepo3g03067 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 694 | 704 | - | - | |
Mepo3g03067 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 466 | 480 | - | - | |
Mepo3g03067 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 289 | 303 | - | - | |
Mepo3g03067 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 804 | 816 | - | - | |
Mepo3g03067 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 780 | 799 | - | - | |
Mepo3g03067 | 1060 | PRINTS | P-type cation-transporting ATPase superfamily signature | 672 | 683 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo3g03067 | Mepo-Chr3 | 40812584 | 40816505 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo3g03067 | 32 | 1047 | Primary Pumps ATPases | AT3G63380 | 70.010 | 0.0 | 1362 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo3g03067 | K01537 | - | gmx:100790034 | 1658.27 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo3g03067 | 3 | 40812584 | 40816505 | Mepo3g03067 | 3 | 40812584 | 40816505 | ECH |