Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03067 ATGTCTAATAATCATAATCTACAATATGATGGTACCTCATTTATCATTGACATCACCAATACCCTCACCAAAGTCACTTCCAAATACACCAATGCAAAAAGAAGGTGGCGTTTTGCATACACAGCTATTTATTCTAGAAGGGTTATGCTTTCCCTTGCAAAAGAGGTTATATCTAGAAAAAATTCTAACCCCTACACAAAACTCTTTCATACAGAATCTTCAAGTTCTACCACCACTCTTGATATAATTGAACCACTAATTGGACAACATAATGGAACCAATCATTACTCTTTGGTTTCTGATGTTGTTGATAAAACCAAACTTGCTGATATGGTTAAGGACAAAAACTTGAAGTCCTTAACTGAGTTTGGAGGAGTTGAAGGTGTTGGACATCTTCTTGGAACATTTCCAACGGGAATCATTGGAAGTGACGATGATATTTCGAGACGGATCGAGTTGTTCGGTTCAAATACTTACAAAAAGCCACCACCAAAAGGTCTTTTACATTTTGTGCTTGAAGCTTTCAATGATACAACAATTATCATTCTTCTTGTTTGTGCTGGTCTTTCCCTTGGTTTTGGTATAAAAGAACATGGACCAGGGGAAGGTTGGTATGAAGGTGGAAGTATATTTCTAGCAGTTTTTCTTGTTGTGGTTGTAAGTGCACTAAGCAATTTTAGACAAGAAAGACAATTTCACAAATTGTCTAAGATAAGCAACAATATCAAAGTTGAAGTTGTGAGAAATGGAAGGCCACAACAGATATCAATTTTTGATGTTCTTGTGGGAGATATTGTGTCTCTCAAGATTGGTGATCAAATTCCAGCTGATGGAGTATTTTTATCTGGTTATTCGTTGCAAGTGGACGAATCTAGCATGACAGGTGAGAGCGACCATGTAGAGATTGAGCCTTTAAGAGCTCCTTTTTTGTTGTCCGGCGCAAAAGTTGTGGATGGATATGCTCAGATGCTAGTAACATCTGTGGGAAAAAACACATCATGGGGACAAATGATGAGCTCGATATCGCGAGACACTAACGAAAGAACGCCGTTACAAGCACGCCTCGACAAGTTAACCTCTTCAATCGGAAAGGTTGGACTTGCAGTAGCGTTTCTTGTTCTTCTAGTGTTGTTAATTCGTTATTTCACCGGTAACTCACATGATGATAAAGGGAATAAGGAATTTCGAGGAAGCAAAACCGATATAAACGATGTTATGAATTCTGTTGTGAGTATCATTGCGGCTGCAGTCACTATTGTGGTCGTTGCCATCCCTGAGGGTTTGCCATTGGCTGTGACACTCACTCTTGCTTACTCCATGAAGAGAATGATGGCAGATCATGCTATGGTGAGGAAACTTTCAGCTTGTGAAACTATGGGATCAGCAACAGTTATCTGCACTGATAAAACAGGTACCTTGACATTGAATCAAATGAGGGTGACCAAGTTTTGTCTTGGTCTTGAAAATATTAAGGAAAACTTTTCCAATGCTATGGCACCAAAAGTTCTTGAGTTGTTCCATCAAGGGGTAGGACTCAACACAACTGGTAGTGTCTATAAGCCTCCATCAGGATCTGAACCTGAAATTTCAGGGAGTCCAACGGAGAAAGCTATACTCATGTGGGCAGTATTGGATTTAGGTATGGACATGGATGAAATGAAACAGAAGCATAAAGTCCTTCATGTTGAAACATTTAACTCGGAGAAGAAACGAAGCGGTGTTGCTATAAGGAAAGAGAACGACGACAACAGTGTTCATGTGCATTGGAAAGGAGCTGCAGAGATGATACTTGCAATGTGTACAAACTATATTGATAGTAATGGCGCGAGGAAGTCCCTTGACGAAGAAGAACGGAGTAAAATTGAGAGAATCATTCAAGGTATGGCTGCTAGTAGTTTAAGATGTATTGCATTTGCTCACACGGAGATTTCAGATTCCGAAGATATTGATTATATGATCAAAAGGGAGAAAAAAACACATCAAATGCTTAGAGAAGATGGATTGACATTGCTTGGCATTGTTGGCCTCAAGGATCCTTGCAGACCAAACACTAAGAAAGCTGTGGAAACTTGCAAAGCTGCAGGAGTTGAAATTAAGATGATCACCGGCGATAACATATTCACTGCTAAGGCAATTGCAACAGAATGTGGAATATTAGATTCTAATAATGATCATGAAATTGCTGGAGAAGTGGTGGAAGGTGTTGAATTCAGAAACTATACAGAGGAAGAGAGAATGGAAAAAGTCGATAAGATCCGAGTAATGGCAAGATCATCCCCTATGGACAAACTTTTGATGGTGCAATGCTTAAGAAAGAAAGGTCATGTAGTTGCGGTCACAGGCGACGGCACAAACGATGCACCTGCCTTAAAAGAAGCTGATATAGGACTTTCTATGGGAATCCAAGGAACCGAAGTCGCCAAAGAAAGTTCCGATATCGTCATCTTAGACGACAACTTCAATTCTGTTGCAACTGTTTTAAGGTGGGGAAGATGTGTTTACAACAATATCCAGAAATTTATTCAGTTTCAACTAACAGTGAATGTAGCAGCACTTGTGATAAACTTTATTGCAGCAGTTTCTTCTGGTGATGTTCCCTTAACAACAGTTCAACTTCTTTGGGTGAATCTCATTATGGATACACTAGGTGCTTTGGCACTAGCAACAGAAAGGCCTACAAAGGAGTTAATGAAGAAAAAGCCAATAGGTCGAACCGCGCCTCTTATTACAAACATTATGTGGAGAAACCTTCTAGCTCAAGCTTCATATCAGATTGCAGTTCTTCTGATTATGCAGTTTTATGGAAAATCAATCTTCAATGTAAGTAAGGAGGTAAAGGATACACTAATTTTTAATACTTTTGTTCTCTGCCAAGTTTTCAACGAATTCAACTCAAGAAGCATGGAGAAACTATATGTATTTGAAGGGATTCTTAAAAACCACTTGTTTCTTGGAATTATTGGGATTACTATTGTTCTTCAAATCTTGATGGTGGAACTGCTAAGGAAGTTTGCTGATACAGAAAGATTAACATGGGAGCAATGGGGAATTTGTATTGGAATTGCAGTTGTTTCATGGCCACTTGCTTGCTTAGTAAAGCTCATACCCGTTTCAGATAAACCTTCCTTCAGTTATACTAAGTGGGTTAAATTATTAGTCTTCAAGATTAAGAATGCTTTTTAA 3183 0.3886 MSNNHNLQYDGTSFIIDITNTLTKVTSKYTNAKRRWRFAYTAIYSRRVMLSLAKEVISRKNSNPYTKLFHTESSSSTTTLDIIEPLIGQHNGTNHYSLVSDVVDKTKLADMVKDKNLKSLTEFGGVEGVGHLLGTFPTGIIGSDDDISRRIELFGSNTYKKPPPKGLLHFVLEAFNDTTIIILLVCAGLSLGFGIKEHGPGEGWYEGGSIFLAVFLVVVVSALSNFRQERQFHKLSKISNNIKVEVVRNGRPQQISIFDVLVGDIVSLKIGDQIPADGVFLSGYSLQVDESSMTGESDHVEIEPLRAPFLLSGAKVVDGYAQMLVTSVGKNTSWGQMMSSISRDTNERTPLQARLDKLTSSIGKVGLAVAFLVLLVLLIRYFTGNSHDDKGNKEFRGSKTDINDVMNSVVSIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADHAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFCLGLENIKENFSNAMAPKVLELFHQGVGLNTTGSVYKPPSGSEPEISGSPTEKAILMWAVLDLGMDMDEMKQKHKVLHVETFNSEKKRSGVAIRKENDDNSVHVHWKGAAEMILAMCTNYIDSNGARKSLDEEERSKIERIIQGMAASSLRCIAFAHTEISDSEDIDYMIKREKKTHQMLREDGLTLLGIVGLKDPCRPNTKKAVETCKAAGVEIKMITGDNIFTAKAIATECGILDSNNDHEIAGEVVEGVEFRNYTEEERMEKVDKIRVMARSSPMDKLLMVQCLRKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFNSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMKKKPIGRTAPLITNIMWRNLLAQASYQIAVLLIMQFYGKSIFNVSKEVKDTLIFNTFVLCQVFNEFNSRSMEKLYVFEGILKNHLFLGIIGITIVLQILMVELLRKFADTERLTWEQWGICIGIAVVSWPLACLVKLIPVSDKPSFSYTKWVKLLVFKIKNAF 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03067 1060 Pfam haloacid dehalogenase-like hydrolase 464 794 - -
Mepo3g03067 1060 Gene3D - 173 1034 - -
Mepo3g03067 1060 Pfam Cation transporter/ATPase, N-terminus 125 190 IPR004014 -
Mepo3g03067 1060 Gene3D - 476 679 IPR023299 GO:0000166
Mepo3g03067 1060 SUPERFAMILY Calcium ATPase, transduction domain A 241 340 IPR008250 -
Mepo3g03067 1060 SUPERFAMILY HAD-like 464 885 IPR036412 -
Mepo3g03067 1060 SUPERFAMILY Calcium ATPase, transmembrane domain M 124 1038 IPR023298 -
Mepo3g03067 1060 PANTHER CATION TRANSPORTING ATPASE 101 1038 - -
Mepo3g03067 1060 Pfam E1-E2 ATPase 242 444 - -
Mepo3g03067 1060 SFLD Haloacid Dehalogenase 448 833 - -
Mepo3g03067 1060 SMART Cation_ATPase_N_a_2 122 195 IPR004014 -
Mepo3g03067 1060 Gene3D - 463 825 IPR023214 -
Mepo3g03067 1060 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 472 683 IPR023299 GO:0000166
Mepo3g03067 1060 PRINTS Sodium/potassium-transporting ATPase signature 459 480 - -
Mepo3g03067 1060 PRINTS Sodium/potassium-transporting ATPase signature 210 230 - -
Mepo3g03067 1060 PRINTS Sodium/potassium-transporting ATPase signature 587 605 - -
Mepo3g03067 1060 NCBIfam calcium-translocating P-type ATPase, PMCA-type 106 1037 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mepo3g03067 1060 FunFam Calcium-transporting ATPase 674 825 - -
Mepo3g03067 1060 FunFam Calcium-transporting ATPase 476 679 - -
Mepo3g03067 1060 FunFam Calcium-transporting ATPase 797 1039 - -
Mepo3g03067 1060 SFLD p-type atpase 448 833 IPR044492 -
Mepo3g03067 1060 ProSitePatterns E1-E2 ATPases phosphorylation site. 468 474 IPR018303 -
Mepo3g03067 1060 NCBIfam HAD-IC family P-type ATPase 408 493 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo3g03067 1060 NCBIfam HAD-IC family P-type ATPase 751 860 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo3g03067 1060 NCBIfam HAD-IC family P-type ATPase 210 383 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo3g03067 1060 FunFam Calcium-transporting ATPase 218 342 - -
Mepo3g03067 1060 Pfam Cation transporting ATPase, C-terminus 865 1035 IPR006068 -
Mepo3g03067 1060 Gene3D - 143 342 - -
Mepo3g03067 1060 CDD P-type_ATPase_Ca_PMCA-like 147 913 - -
Mepo3g03067 1060 PRINTS P-type cation-transporting ATPase superfamily signature 694 704 - -
Mepo3g03067 1060 PRINTS P-type cation-transporting ATPase superfamily signature 466 480 - -
Mepo3g03067 1060 PRINTS P-type cation-transporting ATPase superfamily signature 289 303 - -
Mepo3g03067 1060 PRINTS P-type cation-transporting ATPase superfamily signature 804 816 - -
Mepo3g03067 1060 PRINTS P-type cation-transporting ATPase superfamily signature 780 799 - -
Mepo3g03067 1060 PRINTS P-type cation-transporting ATPase superfamily signature 672 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03067 Mepo-Chr3 40812584 40816505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03067 32 1047 Primary Pumps ATPases AT3G63380 70.010 0.0 1362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03067 K01537 - gmx:100790034 1658.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03067 3 40812584 40816505 Mepo3g03067 3 40812584 40816505 ECH