Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03059 ATGGAGCAGTATGAAGTTCTAGAACAGATTGGTAAAGGTGCATTTGGTTGTGCTCTGCTTGTGAGACACAAGCATGAAAAGAAAAAGTATGTCCTCAAGAAGATCCGTCTTGCTCGCCAAACGGACAGAACCCGTAGGTCGGCCCATCAAGAGATGGAGCTTATATCTAAAGTTCGCAATCCCTTTATTGTGGAGTATAAAGATTCTTGGGTAGAAAAGGGTTGTTTTGTATGTATTATCATCGGCTATTGCGAAGGAGGGGATATGGCTGAAACTGTAAAAAAGGCCAATGGTGTTAACTTTCCTGAAGAGAAACTCTGCAAGTGGCTTGTCCAGTTATTGATGGCTCTTGATTACTTACATGTAAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACTAAGGATCAAGATATACGTCTAGGAGACTTTGGTCTTGCTAAACTGTTGACATCTGATGATCTTGCTTCCTCAATTGTTGGGACTCCAAGTTATATGTGCCCCGAGCTTCTAGCAGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGATGTTGTGTTTACGAAATGGCTGCTCACAGGCCAGCTTTTAAAGCTTTTGACATACAAGCTTTGATTCACAAAATAAACAAGTCTATTGTATCTCCACTGCCAACTATGTACTCTAGTGCTTTCCGAGGGCTTGTCAAAAGTATGCTGCGGAAAAATCCAGAGCTAAGGCCAACTGCAGGGGAGTTACTAAATCATCCACATCTTCAGCCTTACATTCTTAAAATTCACCAAAAACTAAATAGCCCCAGAAGAAATGCTTTTCCGCTCCAATGGCCCAATTCAAACTATGGTAGGAGAACTCGATTTGTGGAGCCAGAATCTGTTTCTACTCTTTCTGACCAAGACAGATATCTGTCACTAAACAATCACAGGGCCTTGAATCCTAGTATTTCTGGAACTGAACAAAGTTCTCAATATTCTACGCAAAGAGGTCAAGGATTATCCACTTGTTCAGAAGAGAAGCTCTACAACTTATCTGCTCGTGGTGTCCGTGATTACTGCAATACTAACAAATCAAAAGCCATAAAGTCCTCAACTGGTGAGAGAACACCAAGACTTAGAATAGCTAAGGATTCTTCCGCTGCCAGAAGGCAGACACTGGCACCACCAAAGATACATGTTACTGGTCCAAAGCGTGAATCGCTTCCGGTGCCTCGTGCACCATCGGGTAAGTCTACCATGCCAACTCGAAGAGCATCCCTTCCGCTTCATACAAGAGGAAGGAACACAACAAGCTTCTACACCAATGTTGATTACGCAGACTCTCCCAATGTTTCTGTTGATGCACCACAGATTGACAAGATGGCAGAATTCTCAACGGCCTCTTATGAGGATCCTTTCTTCCATGTCATTCGCAGATCATCATCAGCATCAGCCAAACACTCTTCTACCTCAACAGGGAGTGCTGATTGCACAATCACAAAGGACAAGTGTACAATCCTGGTGGACAAAAAAGTTACTGTCCCCACCAGCATCACTGATGCTGGCACTGATCTTCGATTTCCAAAGGGCAGTGCCAGTGAATGCTCTAACTATGTTACAACTGGCGTTTCAAGCCGTTCCTCATCCGAGTCACGTCAGCATCGGTTTGACACATCGTCGTACCAGCAACGTGCTGAGGCATTGGAGGGGCTGCTGGAGTTCAGTTCTAGGCTGCTACAACAACATAGGTTTGACGAGCTTGGCGTATTGCTGAAGCCATTTGGGCCTGAGAAGGTTTCTCCAAGGGAAACAGCTATTTGGTTGGCCAAGAGCTTTAAACAAAACAGTGATCTAAGGTTTCCTCATACACTTGCATGA 1869 0.4377 MEQYEVLEQIGKGAFGCALLVRHKHEKKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAETVKKANGVNFPEEKLCKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKDQDIRLGDFGLAKLLTSDDLASSIVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHRPAFKAFDIQALIHKINKSIVSPLPTMYSSAFRGLVKSMLRKNPELRPTAGELLNHPHLQPYILKIHQKLNSPRRNAFPLQWPNSNYGRRTRFVEPESVSTLSDQDRYLSLNNHRALNPSISGTEQSSQYSTQRGQGLSTCSEEKLYNLSARGVRDYCNTNKSKAIKSSTGERTPRLRIAKDSSAARRQTLAPPKIHVTGPKRESLPVPRAPSGKSTMPTRRASLPLHTRGRNTTSFYTNVDYADSPNVSVDAPQIDKMAEFSTASYEDPFFHVIRRSSSASAKHSSTSTGSADCTITKDKCTILVDKKVTVPTSITDAGTDLRFPKGSASECSNYVTTGVSSRSSSESRQHRFDTSSYQQRAEALEGLLEFSSRLLQQHRFDELGVLLKPFGPEKVSPRETAIWLAKSFKQNSDLRFPHTLA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03059 622 Gene3D Transferase(Phosphotransferase) domain 1 86 328 - -
Mepo3g03059 622 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03059 622 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03059 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mepo3g03059 622 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Mepo3g03059 622 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mepo3g03059 622 MobiDBLite consensus disorder prediction 316 335 - -
Mepo3g03059 622 MobiDBLite consensus disorder prediction 368 382 - -
Mepo3g03059 622 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 570 - -
Mepo3g03059 622 MobiDBLite consensus disorder prediction 364 421 - -
Mepo3g03059 622 SUPERFAMILY Protein kinase-like (PK-like) 1 331 IPR011009 -
Mepo3g03059 622 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Mepo3g03059 622 CDD STKc_Nek 3 258 - -
Mepo3g03059 622 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g03059 622 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03059 Mepo-Chr3 40736752 40743400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03059 10 259 MAP Kinase Kinase Kinase AT1G53570 31.373 9.71e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mepo3g03059 Pkinase 1.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03059 K08857 - gmx:100810347 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03059 3 40736752 40743400 Mepo3g03059 3 40736752 40743400 ECH
Mepo3g03059 3 40736752 40743400 Mepo4g02897 4 37925270 37930100 PCT