Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03043 ATGCCAACTACACTTAGAACAAGAAGAAGAAACAACCTCAAACACCTCAATTACCTATGTTTCTCAACTTTCATAAAACCTCAATCTCCTCCTACATCATCCCTTCTTGATCACAATCGTCCATCACTCTCCGAACCTCAACCCGCCGACATTGCCACCGCCGTCGCCTCCAACCGCTTCTTTTTCTCCTCTCCCGGCCGTTCCAACTCCATAGTTGAATCCACCGTATCCTCCTCCTCGCCAGCACCGACAATTGATTCTAACAAAAAGAAGGTAGTTTTGAACAGAAGTGTGGCGGTGGCAACATACTCACCGGACCCTTACATGGATTTTCGGCAGTCAATGCAAGAGATGGTGGAAGCGCAACCAGAGTTGATGAAGGACGTGAAGTCCAACTGGGATACCTTACACGACCTTCTTCTTAGCTATCTCGCTATTAATCCCAACAATACTCACAAGTTCATTCTTGATGCTTTTTCTGATCTTATTGTTACTCTCATGTCCTTTTCATCTTCTTCTTCTTCACCATCTTCTTCGTGA 540 0.4519 MPTTLRTRRRNNLKHLNYLCFSTFIKPQSPPTSSLLDHNRPSLSEPQPADIATAVASNRFFFSSPGRSNSIVESTVSSSSPAPTIDSNKKKVVLNRSVAVATYSPDPYMDFRQSMQEMVEAQPELMKDVKSNWDTLHDLLLSYLAINPNNTHKFILDAFSDLIVTLMSFSSSSSSPSSS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03043 179 NCBIfam uncharacterized plant-specific domain TIGR01568 98 167 IPR006458 -
Mepo3g03043 179 Pfam Transcriptional repressor, ovate 104 166 IPR006458 -
Mepo3g03043 179 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 42 166 IPR038933 GO:0045892
Mepo3g03043 179 ProSiteProfiles OVATE domain profile. 100 165 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03043 Mepo-Chr3 40529094 40529686 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mepo3g03043 Ovate 5.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03043 - - gmx:102660213 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03043 3 40529094 40529686 Mepo3g03043 3 40529094 40529686 ECH
Mepo3g03043 3 40529094 40529686 Mepo4g02916 4 38201082 38202060 PCT