Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03032 ATGGATCTTCGCAACAATACCCAAAGTTTGAAGAGAAAACTCGATTGGACTGAAGAAGATGAAGAAGAAGAAGTAAAAACCAAACCTCGTCGTTTAGATCTTCCCACTGATATTTCTAATCGCATTCATCTTCTCAAATCCGCTTTTTCATCTTCTCGCTCTGATCGTTCTTCCGCTAATTGCGCTCTCTTCGTCCTCTCCGAATTCGCCAAAGACGAGGATATTGTTGATGTTATAGTCAAATACGGTGCTGTTCCTGTTCTGGTGGAGATTCTGGTGACGGCCGGAGATTGTGATGCCGATTCTTATAAGTATGATATGGAGAAGGAGTGTGCGTTCATCCTTGGTCTCCTCGCTGTCAAACCAGAGTATCAACGACTCATTGTTGATGCTGGAGCCTTGTCCTATCTCATAGAGTTGTTAAAGAGACCCAAAAGCCCTGTAATTTCTCAAACACTGTTTTCTGGTCTTCTTAGGAGAGCAGCTGACGCAATAACCAGCCTTGCCCATGAAAATACCAACATCAAGACCCTTGTCAGGTTGGACGGTGGTATCCCTCCTCTTGTTGAATTGCTTGAATTCAATGATACAAAGGTACAGAGAGCAGCTGCAGGTGCTTTACGGACTCTCGCATTTCAAAATGCTGAGAATAAAAATCAGATTATTGAGTGCAATGCGTTGCCAACTCTTGTACTAATGCTTGGATCAGAAGATTCCTCGATACATTATGAAGCGGTTGGCGTGATTGGAAATCTGGTCCATTCTTCGCCAGAAATTAAGAGAGAAGTTCTTCTGGCTGGGGCTTTACAGCCAGTTATTTGCTTACTAAGCTCCTGCTGTTTGGAGAGCCGAAGAGAAGCAGCTCTTTTAATTGGTCAATTTGCTACAACGGATTCAGATTGCAAGATTCACATTGCCCAAAGAGGGGCTATAAACCCCTTAATCGAGATGCTTAAGTCTTCAGATTTACAGCTTAGGGAAATGTCAACTTTTGCACTTGGGAGGTTGGCACAGGACTCACACAATCAAGCTGGTATTGCTTATAACGGAGGTATAGAGCCTCTGCTTGATCTTCTTGACACAAAGAATGGTTCTGTTCAACACAACGCAGCTTTTGCTCTCTATGGTCTGGCTGATAATGAGGACAATGTTGCGGTTATAATTAAGGCTGGCGGTTTTCAAAAACTGCATGATGGACATTTCAATGCTCAACCTACTCAAGAGTGTGTAACAAAGACGTTAAAAAGGTTGGAAGAGAAGATGCAAGGGCGGGTACTAAAACACATGTTATATCTTATGCGCACTGGGGAAAAGGATCTTCAAATACGTGTAGCTCTTGCTCTTGCACATTTATGTTCCCCTGGCGATCGTAAAACTATATTTATTGACAATAATGGATTAGAACTGCTGTTGAATCTTCTCCAATCTACAAATCCAAAGCAGAAAGGTGATGCTTCAGCAGCGCTTCACACAATGGCTACGAAAGACATGTGTTCCTCTATTGTTGATCCTGCTCCTACATCACCAACTCCCCAGGTTTACTTGGGTGAGCAATATGTAAACAATCCTAAACTTTCTGATGTCACATTCATTGTTGAAGGCAAAAGCTTCTATGCTCATAGAGTTTGTCTACTTTCTTCTTCTGATACATTTCGTGCAATGTTTGATGGGGGCTATCGGGAAAAGGAAGCCAAAAATATAGAGATTCCAAATATTAAATGGGATGTCTTTGAGTTGATGATGAGGTATATATACACTGGAGCAGTAGATATTGATTTAGATCTTGCTCCGGACCTCCTTAAAGCTGCAGATCAATATCTTCTTGATGGTCTTAAGAGTCTTTGCGAATATGCTATTTCTGAGGATATTTCTGTGGAAAATGTTTCACAGATGTATGTGATGTCAGACACTTTTAATGCTACATCGTTAAGATATGCGTGCATACTCTTTGTCCTGGAGCAATTTGATAATCTGAGTACCAAACCATGGTACCGTCGCTTTCTTCATTGCATTGTACCAGACATTCACAAATTCTTCTCAACTCTTCTTACCCATCCTCATTTGGCTAACTCATGCTGTCGTGTGGATCCTTAG 2094 0.4164 MDLRNNTQSLKRKLDWTEEDEEEEVKTKPRRLDLPTDISNRIHLLKSAFSSSRSDRSSANCALFVLSEFAKDEDIVDVIVKYGAVPVLVEILVTAGDCDADSYKYDMEKECAFILGLLAVKPEYQRLIVDAGALSYLIELLKRPKSPVISQTLFSGLLRRAADAITSLAHENTNIKTLVRLDGGIPPLVELLEFNDTKVQRAAAGALRTLAFQNAENKNQIIECNALPTLVLMLGSEDSSIHYEAVGVIGNLVHSSPEIKREVLLAGALQPVICLLSSCCLESRREAALLIGQFATTDSDCKIHIAQRGAINPLIEMLKSSDLQLREMSTFALGRLAQDSHNQAGIAYNGGIEPLLDLLDTKNGSVQHNAAFALYGLADNEDNVAVIIKAGGFQKLHDGHFNAQPTQECVTKTLKRLEEKMQGRVLKHMLYLMRTGEKDLQIRVALALAHLCSPGDRKTIFIDNNGLELLLNLLQSTNPKQKGDASAALHTMATKDMCSSIVDPAPTSPTPQVYLGEQYVNNPKLSDVTFIVEGKSFYAHRVCLLSSSDTFRAMFDGGYREKEAKNIEIPNIKWDVFELMMRYIYTGAVDIDLDLAPDLLKAADQYLLDGLKSLCEYAISEDISVENVSQMYVMSDTFNATSLRYACILFVLEQFDNLSTKPWYRRFLHCIVPDIHKFFSTLLTHPHLANSCCRVDP 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03032 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 132 183 IPR000225 GO:0005515
Mepo3g03032 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 350 392 IPR000225 GO:0005515
Mepo3g03032 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 183 218 IPR000225 GO:0005515
Mepo3g03032 697 SUPERFAMILY ARM repeat 423 496 IPR016024 -
Mepo3g03032 697 ProSiteProfiles BTB domain profile. 526 593 IPR000210 GO:0005515
Mepo3g03032 697 MobiDBLite consensus disorder prediction 1 29 - -
Mepo3g03032 697 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 5 687 IPR044282 -
Mepo3g03032 697 SMART BTB_4 526 623 IPR000210 GO:0005515
Mepo3g03032 697 Pfam Armadillo/beta-catenin-like repeat 183 211 IPR000225 GO:0005515
Mepo3g03032 697 Pfam Armadillo/beta-catenin-like repeat 214 253 IPR000225 GO:0005515
Mepo3g03032 697 Gene3D Potassium Channel Kv1.1; Chain A 514 652 IPR011333 -
Mepo3g03032 697 Gene3D - 39 340 IPR011989 -
Mepo3g03032 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 225 267 IPR000225 GO:0005515
Mepo3g03032 697 SUPERFAMILY ARM repeat 55 395 IPR016024 -
Mepo3g03032 697 Pfam BTB/POZ domain 518 621 IPR000210 GO:0005515
Mepo3g03032 697 SUPERFAMILY POZ domain 517 620 IPR011333 -
Mepo3g03032 697 SMART arm_5 298 338 IPR000225 GO:0005515
Mepo3g03032 697 SMART arm_5 256 296 IPR000225 GO:0005515
Mepo3g03032 697 SMART arm_5 72 120 IPR000225 GO:0005515
Mepo3g03032 697 SMART arm_5 339 379 IPR000225 GO:0005515
Mepo3g03032 697 SMART arm_5 454 494 IPR000225 GO:0005515
Mepo3g03032 697 SMART arm_5 214 254 IPR000225 GO:0005515
Mepo3g03032 697 SMART arm_5 121 170 IPR000225 GO:0005515
Mepo3g03032 697 SMART arm_5 172 212 IPR000225 GO:0005515
Mepo3g03032 697 Gene3D - 341 421 IPR011989 -
Mepo3g03032 697 Gene3D - 422 505 IPR011989 -
Mepo3g03032 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 309 351 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03032 Mepo-Chr3 40402479 40407929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03032 192 456 U-box Gene Family AT3G46510 27.925 6.47e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mepo3g03032 BTB 7.6e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03032 - - qsu:112036025 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03032 3 40402479 40407929 Mepo3g03032 3 40402479 40407929 ECH