Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03014 ATGAACTATCAAATGAATGGTGAAGATGCACGCAGAGATTTAAAAAGAAAGCTCCCTCAGATAGATCGAGGGCAAGAACGGAGACCTTATAATTATAATACGAATTACGATAGGAATGCGCTTCCTCCTGGTTGGTTAGGCTGCCCAGCACATGGGCAAGAACTAGGATGCATAATCCCTTCAAAGGTTCCACTTGGTGAATCATTCAATGATCACATCCCAAATAATAAATATACTCCCAAGCAAGCAATTCTTCAACAGAGAGCTTTAGGTAGAGAACTTGGTTTAGTGATTGATCTGACAAATACCACTCGTTACTATCCACTATCAGATTGGAGAAAAGAAGGAATACAGCATGTCAAGATAAGATGCCAAGGAAGAGATTCTGTACCTGATGATGAATCTGTACAAAAGTTTTGCAATGAGATTCTGGATTTTCGCTCTCGAAGACCAAACGCAGAGAAATATATACTTGTACATTGCACTCATGGGCATAATCGTACAGGTTATATGGTTGTTCATTTTCTTGTGCGTACAGAATCAATTTCTGTCACTGAGGCAATACATAAATTTGCTCAGGCACGTCCTCCAGGAATATACAAGGAGGATTACATTGACTCCTTGTACATGTTTTTTAATGAAAGGAAGCCTGAAAGTCTTGTTTGTCCACAAACTCCAGAATGGAAGAGTCTTCCTGATCCTGACTTTCATGGTGTATCTGTCTCAGCTACTGACAATTATGCAGACATTTTGCAGCAGGAGAATATTGTGAGGAATGAAGTAATGACAAATGATGATGTTTTGGGAGATCCCATTCCTTCAAATCAGCTACGTGCAATGCGAGAAGTTTGCTATCAACTGCTCAAGTTGGGCACAGGGGGAAAAGGACTACAGTTTCCTGGATCACACCCTGTTTCTCTGAACAGGGAAAATTTGCAACTCTTAAGACAGAGGTATTACTATGCCACGTGGAAAGCTGATGGGACACGGTATATGATGCTAATCACTGGGGATGGATGTTATCTGATTGACAGAAAATTTCTTTTCCAAAGGATCTCTATGCGGTTTCCTTGCAGATACTCTAAAGGGGGTACACCTGAGCGGAATCACCACTACACATTACTTGACGGGGAGATGATTATTGACACAGATCCACATACACATAAGCAAGAAAGAAGATACCTCATTTATGATTTGATAGCAATCAATCAAGTCTCTCTGACACAGATGCCATTCTACGAAAGGTGGAAGTTGCTGGAGAAAGAAGTAATTGAGCCTCGTAACATGGAACGAGAAGCCCTTTCCAAGAGTACAAGTCCTTACTATATATACGACTTGGAACCTTTTGGTGTAAGGAGGAAGGGTTTTTGGTTACTATCTACTGTGTCAAAGCTCCTTCATAAATTCATTCCAGGCCTCTCACATTCATCAGACGGTCTTGTGTTCCAGGGTTGGGATGATCCGTATGTCCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATACCCTGAGATGAACTCTGTTGATTTCCACTTTGAGGTGGGAGCTGGTAATCGACCCCTTCTTTTTCTGTTTGAACGTGGAAAGAAGAAGTTAATGGAAGGGAATACTGTTACTTTTAAAGATGCAGAAGATATTTCTTTCTATTCAGGGAGGATTATTGAGTGCTACTGGGATGCTGCAGAGCATCACTGGGTCTGTATGCGTATCAGAACTGATAAAGCAACTCCAAATGAATTCATTACCTATAAAAAGGTAATGCGAAGCATAAAGGATAATATCACAGAAGAGGTCCTGTTGAATGAGATCAGTGAGATCATTCAACTACCCTTGTATGCAGACAGAATAGATAGGGATATCAAGGCTCACCAGCATATGGTCTCGTCACGGCGCAAGTGA 1899 0.4123 MNYQMNGEDARRDLKRKLPQIDRGQERRPYNYNTNYDRNALPPGWLGCPAHGQELGCIIPSKVPLGESFNDHIPNNKYTPKQAILQQRALGRELGLVIDLTNTTRYYPLSDWRKEGIQHVKIRCQGRDSVPDDESVQKFCNEILDFRSRRPNAEKYILVHCTHGHNRTGYMVVHFLVRTESISVTEAIHKFAQARPPGIYKEDYIDSLYMFFNERKPESLVCPQTPEWKSLPDPDFHGVSVSATDNYADILQQENIVRNEVMTNDDVLGDPIPSNQLRAMREVCYQLLKLGTGGKGLQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITGDGCYLIDRKFLFQRISMRFPCRYSKGGTPERNHHYTLLDGEMIIDTDPHTHKQERRYLIYDLIAINQVSLTQMPFYERWKLLEKEVIEPRNMEREALSKSTSPYYIYDLEPFGVRRKGFWLLSTVSKLLHKFIPGLSHSSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFHFEVGAGNRPLLFLFERGKKKLMEGNTVTFKDAEDISFYSGRIIECYWDAAEHHWVCMRIRTDKATPNEFITYKKVMRSIKDNITEEVLLNEISEIIQLPLYADRIDRDIKAHQHMVSSRRK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03014 632 CDD Adenylation_mRNA_capping 275 502 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mepo3g03014 632 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 41 228 IPR029021 -
Mepo3g03014 632 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 293 502 - -
Mepo3g03014 632 FunFam mRNA capping enzyme family protein 500 609 - -
Mepo3g03014 632 Pfam Dual specificity phosphatase, catalytic domain 93 212 IPR000340 GO:0008138|GO:0016311
Mepo3g03014 632 Pfam mRNA capping enzyme, C-terminal domain 506 600 IPR013846 -
Mepo3g03014 632 PANTHER MRNA-CAPPING ENZYME 36 614 - -
Mepo3g03014 632 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 137 206 IPR000387 GO:0016311|GO:0016791
Mepo3g03014 632 ProSitePatterns Tyrosine specific protein phosphatases active site. 159 169 IPR016130 GO:0016311|GO:0016791
Mepo3g03014 632 Gene3D - 500 609 IPR012340 -
Mepo3g03014 632 FunFam mRNA capping enzyme, putative 263 499 - -
Mepo3g03014 632 Pfam mRNA capping enzyme, catalytic domain 303 501 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mepo3g03014 632 PIRSF mRNA_capping_HCE 28 632 IPR017074 GO:0004484|GO:0006370|GO:0140818
Mepo3g03014 632 SMART dsp_5 69 214 IPR020422 GO:0006470|GO:0008138
Mepo3g03014 632 Gene3D Protein tyrosine phosphatase superfamily 16 234 IPR029021 -
Mepo3g03014 632 CDD RNA_5'-triphosphatase 44 210 - -
Mepo3g03014 632 FunFam mRNA capping enzyme family protein 37 249 - -
Mepo3g03014 632 Gene3D DNA ligase/mRNA capping enzyme 263 499 - -
Mepo3g03014 632 MobiDBLite consensus disorder prediction 8 24 - -
Mepo3g03014 632 SUPERFAMILY Nucleic acid-binding proteins 504 617 IPR012340 -
Mepo3g03014 632 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03014 Mepo-Chr3 40234719 40244061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03014 31 622 Protein tyrosine phosphatase (PTP) family AT3G09100 61.296 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03014 K13917 - gmx:100793183 1079.7