Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02963 ATGTTGTGTTGTGGAGGTGCAGAAGAAGATACCAGCGGGCCATCTTCAAACCAATACGCTGCACCATCAAGAGGGGGTAACACATATGGCGGCGGTGGTGGAGGCAATGATAGAGGAGAGCCAAGGAGCAATATTACCAAGAGCGGTGGTCCACAGAAAGTATTACCAATTGAGATACCCTCCATATCGTTGGCTGAGATAAATAGATTAACAGGAAACTTTGGTTCAAAGGCCTTCATTGGTGAAGGTTCATATGGAAGGGTTTACTATGCAAAAATGAATGATGGTATTGAAGTTGCAATCAAAAGGCTGGATACAAGTTCTTCACCTGATTCTGACTCCAACGATTTCGCTGCTCAGTTATCAGTTGTTTCAAGACTCAAGCATGACAATTTTGTAGAGTTGACGGGATATTGTCTAGAAGCAGACAACAGAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGATGTATTACATGGAAGGAAGGGCGTACAAGGTGCCGAACCTGGTCCAGTCTTGAGCTGGAACCAGAGAGCAAAAATTGCATTTGGTGCAGCAAAAGGATTAGAGTTTCTTCATGAAAAGGTTCAGCCTTCTATTGTTCATCGCGACGTTCGATCCAGCAATGTCTTGTTATTCAATGACTATGAGGCCAAGATTGCTGATTTCAGCTTGACGAATCAGTCTTCTGATACGGCAGCTCGGCTACATTCAACGAGAGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCAATGACAGGGCAGATAACACAAAAAAGTGATGTTTATAGTTTTGGAGTTGTGCTTTTAGAACTCTTGACTGGAAGAAAGCCAGTAGACCACACAATGCCTAAAGGGCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGACTACCCCCCAAAGGCAATTGCTAAGTTGGCAGCTGTTGCAGCACTGTGTGTGCAATATGAAGCTGATTTCCGGCCAAACATGACAATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATGCAAAACCGGCTGGTCCTGACTCTAATGCTTGA 1107 0.4372 MLCCGGAEEDTSGPSSNQYAAPSRGGNTYGGGGGGNDRGEPRSNITKSGGPQKVLPIEIPSISLAEINRLTGNFGSKAFIGEGSYGRVYYAKMNDGIEVAIKRLDTSSSPDSDSNDFAAQLSVVSRLKHDNFVELTGYCLEADNRILVYQYASLGSLHDVLHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPDSNA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02963 368 FunFam PTI1-like tyrosine-protein kinase 3 153 362 - -
Mepo3g02963 368 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Mepo3g02963 368 ProSitePatterns Tyrosine protein kinases specific active-site signature. 203 215 IPR008266 GO:0004672|GO:0006468
Mepo3g02963 368 Gene3D Transferase(Phosphotransferase) domain 1 153 363 - -
Mepo3g02963 368 Gene3D Phosphorylase Kinase; domain 1 42 151 - -
Mepo3g02963 368 ProSiteProfiles Protein kinase domain profile. 74 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02963 368 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 361 - -
Mepo3g02963 368 Pfam Protein tyrosine and serine/threonine kinase 79 353 IPR001245 GO:0004672|GO:0006468
Mepo3g02963 368 SUPERFAMILY Protein kinase-like (PK-like) 53 353 IPR011009 -
Mepo3g02963 368 SMART tyrkin_6 74 353 IPR020635 GO:0004713|GO:0006468
Mepo3g02963 368 MobiDBLite consensus disorder prediction 1 52 - -
Mepo3g02963 368 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02963 Mepo-Chr3 39706931 39709660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02963 38 360 Receptor kinase-like Gene Family AT3G58690 43.119 4.03e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mepo3g02963 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02963 - - gmx:100812507 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02963 3 39706931 39709660 Mepo4g02136 4 28696975 28701072 PCT