Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02942 ATGAATGTTAATATTGATGATTTTAATCAAGATCCTCTGGCATGGTCGACGGAACTGGCAGGTCACTTTTGTGGCGAATTTTCCATGGCTGCAGTTCAATCTAATGTCAAAATGGAAGACAAGTCCCAGGTTGAAGTTTGCAGATATGCAACCTTTGTTGGCATTTATGATGGCTGTAAAGGCGACGATGCTTCTGCATATATCGATGAACACCTCTTCCCCACTCTATTGGGGCATATTAAGGACAATATTGATATTGACACTACCGAAGTGGCTGAAGATATTCTGAGACAAGTTGTTTCTGAAATAGAGGCAAGCTTTACTGAGTTTGCAAAAGAGCATTATGATCCTTGGGGAAAGAAACATATGAGTGTGGTTAGTTCAGGCTGTTTGATTTGTATAATATGGAGAGGGAAGCTCTATCTCGCTAATGTTGGAGACTCGCGTGCTGTTCTTGTTTCTCATAAGGGTGATGATCCATTTAAAAGGTTGCGTGTTAAGCAAATGGTCAGAGATCACAGCTGTGAAAATTCGGATATTCGAGAAGAGCTAGCTACACTGTATCCATATGATTATGATAGCATTTGCTCCTATGACTTTGGAGCATGGCGTGTTAAAGGCTTAAGCGAAACAAGCAGATGCATAGGAAATGCGTACATGAAGAAGGCAGAGTTCACTACAACGAGATCTGTCCGAGCCCCACCAGGGGAACATGTGACTTCACTTTTCATAGAACCTTTGCTTTCAGCTGATCCAGAAATTTATACAAGAGTCTTAAAAGACACTGATAAATTCATTATATTTGGATCTGGTGGATTCTGGAAATTACTCACAAATGAGCAAGCTGCTAACATCGTAAACGACAATCCACGAGAGGGAATCGCAGCAAGACTTGCTGCACACGCTCTACAGTCTGCAGCTGAGAAAAAGGGAAAAAACTATCGAGACATATTACAAACTCCTACAGGAAGTGGCATAGGCGGGAGGCGTAATGTTTCTTCTGAAGTAGCTAGGCCGGTCTATCACGATGATATCAGTGTGACTGTTGTATACTTAGAGTTGGATTTGGATGTGCGAGTACAGAGCAGAAGTTATAAAAGTTACTCAAATTTCACTTTACCATCAGACTTTAGTGATTTTGATGATGGTACATGGTAA 1158 0.4111 MNVNIDDFNQDPLAWSTELAGHFCGEFSMAAVQSNVKMEDKSQVEVCRYATFVGIYDGCKGDDASAYIDEHLFPTLLGHIKDNIDIDTTEVAEDILRQVVSEIEASFTEFAKEHYDPWGKKHMSVVSSGCLICIIWRGKLYLANVGDSRAVLVSHKGDDPFKRLRVKQMVRDHSCENSDIREELATLYPYDYDSICSYDFGAWRVKGLSETSRCIGNAYMKKAEFTTTRSVRAPPGEHVTSLFIEPLLSADPEIYTRVLKDTDKFIIFGSGGFWKLLTNEQAANIVNDNPREGIAARLAAHALQSAAEKKGKNYRDILQTPTGSGIGGRRNVSSEVARPVYHDDISVTVVYLELDLDVRVQSRSYKSYSNFTLPSDFSDFDDGTW 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02942 385 SUPERFAMILY PP2C-like 9 352 IPR036457 -
Mepo3g02942 385 Pfam Protein phosphatase 2C 51 308 IPR001932 -
Mepo3g02942 385 Gene3D - 15 358 IPR036457 -
Mepo3g02942 385 PANTHER PROTEIN PHOSPHATASE 24 351 IPR015655 GO:0004722|GO:0006470
Mepo3g02942 385 SMART PP2C_4 20 350 IPR001932 -
Mepo3g02942 385 CDD PP2Cc 27 352 IPR001932 -
Mepo3g02942 385 ProSiteProfiles PPM-type phosphatase domain profile. 23 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02942 Mepo-Chr3 39497229 39499103 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02942 13 380 PP2C-type Phosphatase Gene Family AT5G06750 38.874 5.26e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02942 K01102 - tpra:123896634 289.271