Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02935 ATGGAGTTTAAGAGAGTGCAATGCTCCTACAAATCCTTGGATGAATCGTTCGAAATCGGTAAAGAAATGTATCGTGGACAACAATATAGTCAAATCTACTTCGCTCGTCTTCACTTGATGCGAACTCTCTTGTATTCTCTTGTTCCTCATTGGAAACCTAATTCTCCTGTATGTACAGTGTTGGGATTGGAAGAGGGCAAGGAATGTGTTATTGTTGGAACACTGTTTAAAAATATGAAGTTGAAGCCTTGTATCCTTGATGAGTATTCTAAGGAGAGATCGTTGCCTGTCAAGTCACATAACTTTGTGCATGAAGATGATTATCTTGTTCTGGAAGATGAAAGTGGAAGAGTTAAGCTTGGTGGGAGTATCATTGTACCATCTATCTATGTGACAGGAATTGTGGTTGCTTTACATGGTAAGGAGACGGGAGCAGGTGATTTTTTGGTTCAGGAAGTTCTAGAAGCTGGCTTACCACCGCAGATAGAATTCCCCATTAAATCAAGGGAAGACAAATATGTTGTTCTTGTGTCAGGATTAAGTGTTGGGAGCAGCAAGTCTAACCCTCTTCAGTTTCAGCTTCTTGTTGATCATATTACTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCGGCACAAATTGTTCGTTTAGTCATCGCTGGAAATTCTGTTGAGATGCCTCGTGGACTTCTTAATGGACAGAATTTGGCCTCAAAAGATCTCTCGAAAATGGCAGAACCTGCAAAAGAGCTAGATATTATGTTGAATCAGATTGCTGCTGGTTTGCCACTGGATATCATGCCAGGACCCTGTGACCCTGCTAATTTCTCATTACCACAGCAGGCGTTGCATAAATGCCTTTTCCCTGGGTCATCAGTCTACAACACTTTCAAATCTTGTACAAATCCTCATTGTTTTGAGCTTGATGGTATCAGGTTTCTTGGGACATCTGGTCAGAATGTAGATGATCTTGATAAGTATTCAGAGGCAAAAGATAAGCTTGACTTCATGGAAAGGACATTACGATGGAGGCATTTGGCACCAACTGCACCTAATACCCTTGGCTGCTATCCTTATACTGATAGGGATCCATTCTTCATTGAAAGCTGCCCTCATGTTTACTTTGTTGGCAATCAGGATAGATATGATACTCGCGTGATAAAGGGATCAGAAGGCCAATTAGTTAGACTCGTATGTGTTCCTAAATTCAGTGAAACTGGAGTTGCAGTTATGTTGAATCTGAGGGATCTTGAATGCCATGCTCTCAGTTTTGGAACTCCGTGTATCCCAAAGAAGGCAGAGGGTGACATTGCAGACAGCACGAAGAGTGAAAATTGA 1341 0.4154 MEFKRVQCSYKSLDESFEIGKEMYRGQQYSQIYFARLHLMRTLLYSLVPHWKPNSPVCTVLGLEEGKECVIVGTLFKNMKLKPCILDEYSKERSLPVKSHNFVHEDDYLVLEDESGRVKLGGSIIVPSIYVTGIVVALHGKETGAGDFLVQEVLEAGLPPQIEFPIKSREDKYVVLVSGLSVGSSKSNPLQFQLLVDHITGHLGDEKEQSIAAQIVRLVIAGNSVEMPRGLLNGQNLASKDLSKMAEPAKELDIMLNQIAAGLPLDIMPGPCDPANFSLPQQALHKCLFPGSSVYNTFKSCTNPHCFELDGIRFLGTSGQNVDDLDKYSEAKDKLDFMERTLRWRHLAPTAPNTLGCYPYTDRDPFFIESCPHVYFVGNQDRYDTRVIKGSEGQLVRLVCVPKFSETGVAVMLNLRDLECHALSFGTPCIPKKAEGDIADSTKSEN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02935 446 Gene3D - 35 156 - -
Mepo3g02935 446 Pfam DNA polymerase delta subunit OB-fold domain 28 153 IPR040663 -
Mepo3g02935 446 Pfam DNA polymerase alpha/epsilon subunit B 174 382 IPR007185 GO:0003677|GO:0006260
Mepo3g02935 446 Gene3D - 165 436 - -
Mepo3g02935 446 CDD MPP_PolD2_C 173 425 IPR041863 -
Mepo3g02935 446 FunFam DNA polymerase delta small subunit 156 430 - -
Mepo3g02935 446 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 4 425 IPR024826 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02935 4 427 Core DNA Replication Machinery Family AT2G42120 77.465 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02935 K02328 - gmx:100780072 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02935 3 39437195 39442756 Mepo3g02935 3 39437195 39442756 ECH