Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02927 ATGAGCCGTTTCGAGTCACCAGCTTCTGCTTTTTATGCAACAGAAAACTGCATGGGATTTGCAGAATTTGATCACCAAGTTGATAATAATCAATCTTTGAGTTCTCAATCATATAAGGTTAATGATTTGGAGTTCCCTTTGTGTCAATCTCTAAGGGAAAACAATCATTTATTGGATGCATCAAACCAACATGACCCCAACTTTGAACTGTCTAACACTTTGCAAGCATTGGTGAAATCTCAACTGAATGGTAATCAACACCTTAGATTCCCAGAAAACTTGAATAAATTTTCATGTGGGAATTTTCCTGGGAGCAAGCCTTTTCCAATTGAACAGCAAAAGTTGTTCTTTGATGGTCTTGCCTCAGTTAGCAACAGCTCATCATTTTGTAATAAAGGAAATCATGACTATATGGTTGCTCGTGGATCTTATCATTTATCTGTTGAGCAACTGAATTTCTCTTCTCAGCATGAGAAGTTGTCTCCAACAATTTCAGCAGGAAGTTTATCAACTTCTCTTGGAAGCACTTCTTCTAGTGGGAATGTAGTCTCAAGTAAAACAAGAATTAGATGGACTAAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGGGGTGCTGAGAAAGCAACACCAAAAGCTATATTGAAGATGATGGACTCTGAAGGCTTGACCATATTTCATGTGAAAAGTCATTTGCAGAAATATAGAACTGCAAAATTCATGCCAGAGTCAGCTCAAGGGAAATCTGACAAAAGAATCCATATAGATGATGTGCAGCATGTTGGTGTGAAAACTGGCTTTCAAATCAAGGAGGCACTTCAACTTCAATTAGATGCACAAAGGCGTCTTCATGAACAACTAGAGATTCAAAGAACATTACAATTGCGACTTGAGGAACAAGGCAGACAGCTGAAAAAAATGTTTGATCAGCAGCAGAAGACATGTAATAACCTCTTCAATACTCCAAATACAATCAATGATGATACAAAAAATATTGCTAAAGATGTTGAGGTTTCTATTTCTGAAGGGGCTGAACACATAATTTGA 1056 0.375 MSRFESPASAFYATENCMGFAEFDHQVDNNQSLSSQSYKVNDLEFPLCQSLRENNHLLDASNQHDPNFELSNTLQALVKSQLNGNQHLRFPENLNKFSCGNFPGSKPFPIEQQKLFFDGLASVSNSSSFCNKGNHDYMVARGSYHLSVEQLNFSSQHEKLSPTISAGSLSTSLGSTSSSGNVVSSKTRIRWTKDLHEKFVECVNRLGGAEKATPKAILKMMDSEGLTIFHVKSHLQKYRTAKFMPESAQGKSDKRIHIDDVQHVGVKTGFQIKEALQLQLDAQRRLHEQLEIQRTLQLRLEEQGRQLKKMFDQQQKTCNNLFNTPNTINDDTKNIAKDVEVSISEGAEHII 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02927 351 Gene3D - 185 244 - -
Mepo3g02927 351 SUPERFAMILY Homeodomain-like 184 240 IPR009057 -
Mepo3g02927 351 Coils Coil 273 293 - -
Mepo3g02927 351 Pfam Myb-like DNA-binding domain 190 239 IPR001005 -
Mepo3g02927 351 FunFam Myb family transcription factor 185 243 - -
Mepo3g02927 351 Pfam MYB-CC type transfactor, LHEQLE motif 271 317 IPR025756 -
Mepo3g02927 351 NCBIfam myb-like DNA-binding domain, SHAQKYF class 186 241 IPR006447 GO:0003677
Mepo3g02927 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 165 324 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02927 Mepo-Chr3 39372103 39374572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02927 143 320 G2-like Transcription Factor Family AT3G04450 45.055 1.49e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g02927 Myb_DNA-binding 3.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02927 - - cam:101504038 517.309