Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02926 ATGTACCAACATTGGTCAAAGATGTATGGAACTCAATGGGAATCCTACATAGGAATTAGCAACCTAGTTAAGGTTGTTGGGTCAGACCAAATTGTTGGATCAGAACAGATGAGTTATGAGCCAACCAAATCACCCTGCAACAACATTGTCACCACAAACTTTCAAGGTCAAACACCCCATGAAGATTTTGGTGCAGTGAGTGTAGCCAAAATCAAAAGTAATGTTAGTTTTCAAGGTGAAGAATATTATGATGAGGATGAGATTGAAGTACCTGGTTGGTGCTTTGATCAGTTTCCAAAGATAACAGATCCTCCAATGCTGAATCGTCAAGCCTATGGAGGAGATAATTTTACAACCTCTCAATTCACAAACTCCTTGTACTCTGTTGATGAATCTTTGTTGTCCAACAGTGCAGATAGTCACAATTCTTCTGAAGAAGAATATAGTGATTTTCAGTCTGGAAATATGTCATTTTATAACCACTTTCCGAAAAAACATGATGAATTGTTTAGGAATGATGCTTCCATTGATGAGAAGCCCCTTGAAATTTCCTTTCAGAGAACTAAGTCAGGCTCATCTACAAAGTCACAAAAGCAGACTCCTCAACTTTATGGAATGTGTGCCACTTCTAACAACTCTGCTTCTAGGAAAGCTCTAACATGTAAAAGAAGAGTAAGATGGACAGAAGATCTGCATGAATCATTCATGATGATCGTTGATCACCTTGGTGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTAGATATGATGAAATCAAATTTGCTATCCATTTCTCATGTTAAAAGTCATTTGCAGAAATGTCGATCTACAATACGCGTCGGCGTGCATAAAGCTTTGCAGGGTAAATTTGTTTTGTCATTGCATTCTATTACAACACTGCTTACTTTTTTTTTTATTTTTTTTGAAGGATACAACACTGCTTATCTTTATCTTTCAGAAAGACCCGAGGAAGGACATAGAACAGATAGAGTCGCAGATCTTCAACTCAAAATCCTTAAGCAAATTGAGGAATCACGGCAGTTACATCTAGAGGTTCGAAAAAGTATTTCGCAACAGTTAGAGACGCAAAGAAAGTTGCAATCACTAATTGAACAACATGACAAGAAGCTCAAACTAATGCAAAAAGAAAGAACCAACCAAAGAAAATCATGGACACAACGAGAAAGGACAGTTCCCAAATAA 1203 0.3749 MYQHWSKMYGTQWESYIGISNLVKVVGSDQIVGSEQMSYEPTKSPCNNIVTTNFQGQTPHEDFGAVSVAKIKSNVSFQGEEYYDEDEIEVPGWCFDQFPKITDPPMLNRQAYGGDNFTTSQFTNSLYSVDESLLSNSADSHNSSEEEYSDFQSGNMSFYNHFPKKHDELFRNDASIDEKPLEISFQRTKSGSSTKSQKQTPQLYGMCATSNNSASRKALTCKRRVRWTEDLHESFMMIVDHLGGPEKAKPKAILDMMKSNLLSISHVKSHLQKCRSTIRVGVHKALQGKFVLSLHSITTLLTFFFIFFEGYNTAYLYLSERPEEGHRTDRVADLQLKILKQIEESRQLHLEVRKSISQQLETQRKLQSLIEQHDKKLKLMQKERTNQRKSWTQRERTVPK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02926 400 Coils Coil 363 390 - -
Mepo3g02926 400 NCBIfam myb-like DNA-binding domain, SHAQKYF class 222 276 IPR006447 GO:0003677
Mepo3g02926 400 Gene3D - 221 278 - -
Mepo3g02926 400 SUPERFAMILY Homeodomain-like 221 278 IPR009057 -
Mepo3g02926 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 196 382 IPR044848 GO:0003700
Mepo3g02926 400 MobiDBLite consensus disorder prediction 381 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02926 Mepo-Chr3 39363016 39365616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02926 213 390 G2-like Transcription Factor Family AT3G04450 31.694 1.14e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g02926 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02926 - - psat:127126241 491.886