Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02925 ATGATCGACCTTAGAAAACTGAGATTAACATTCACATTTTTCAATCTCACCCAAAATCACACCAATCTTAAACCCTCCCTAAACCCTAGATTTTACAACACATCGAAAAAACCAATTCAATTAGATTCCAAACCTAAAATTCTCTCAAAATCAACCATTAAAGAAGCCCAAGCTGCATTGTTAGAATATCTCCATTCCACAAGAAGCTTGCAGTTTTTAGATGCAGATAACATGTGCAAAAACTCGCCTTTTTTCCTTCAAAATCTCGTCCACAAAACCCTAAAAAACGAGAAATCGATTAGCACGAAACGATTAATTTCTCGCCACCTGCGTTACAACCCTATTAATGAATTCGAACCCTTTTTCGAGAGTTTGGGTTTGAAGCCTTCTGAATATGAATCTTTGCTTCCACGTGATTTGATTTTCCTCAACGATGATCCTCTTTTGATGGCGAATTATCACACTCTGTGTAACTATGGTGTTCCTCGATCCAAAATGGGGAAAATTTTCAAACAAACGCCTCAAGTTTTTAAATTTGAAAATGGGGTTTTGGTTTCGAAGATTAATGCTTATGAAGATTTGGGTATTTCGGCTTCGATTTTAGTGAATGCTGTTGCTGTAAGTCCAGGGATTTTGGTTGGTGATGTTAATATTCAATTTGTTAAGGTTGTTGAGATGTTGAAGAATATCGTTGGAAAGGGTGGTGATGGTGATTTTGATAGTGGCTTGATTCAGTGGCATTTTTTGGATGAGGTTTCTTGTAATTGGGGTTTAATGCTTGAGCTATTGTGCTTGCTTTCGAATGCTGGTTTCAGTGAGAAACAGTTGGCTGAGATTATTCACTGCAGTCCTTGTATTGTTTTTGAAGAATCAGGAGGCAAGACACTCTCGATGATTGGATTTTTGGTCAAATTTGGATTGTCTGTGAACCAGATTGCCCTCTTGTTTCTCGAGTTTCCACAGATTTCGATGGTCAAGTTTTTCGCCAACTTGAGGGTGTGTCTTCAGCTTCTGACTGAAATTGAGATGGAAGCTAAAGAGATTGGAAAGATTTTCCAGTCTCACACAATACTTGCGGGTTCCAATACTCTAAAGACAACTAAGAGTTTGCTTGGTTGCTTGAATGTGGGCAAGAGGCGTCTATGTAGCATACTGCAGGATAATCCTCATGAAATGAAGAACTGGGTTCTTGGAATAAGAGTTAAGCCTATGGTTGGTTTAAGGGATCTGGAAGAGGAGAAATCGAGGGCGGGGAAGACAGAGTTCTTGTTGCGCTTAGGTTATATGGAAAACACGAAAGAAATGGATTCGGCTTTTAAGGTGTTCAGAGGTAAGGGAGTTGAGCTTCAGGAGAGATTTGATTTTATTGTTAATGCTGGATTGACACGTGATGAAGTTCGTAGAATGATTAGAGTTTCACCTCAGATTCTTAACCAGAACACAGATAGAGTCAAGATGAAAATTGAGTATCTTGTAAAGAAAGGATTTTCTGTATCAGATTTAGTGAGTTTTCCATCATATCTTTCCTATAAATCTCCAAGAGTTAAGCTTAGGTTGTCAATGTATAACTGGCTCGTAGACAATGGGGCTGTAAATCCCGGGCTTGCTTTGAGCACCATTATCGCATGCACAGATGATCTATTCTTAAAAAGTTATGTAAAACGCCATCCGTCTGGCCTTCAAGTTTGGGAAGAGTTGCAAAAAGAAATTTGTTCTGAAGACTCATGA 1728 0.3872 MIDLRKLRLTFTFFNLTQNHTNLKPSLNPRFYNTSKKPIQLDSKPKILSKSTIKEAQAALLEYLHSTRSLQFLDADNMCKNSPFFLQNLVHKTLKNEKSISTKRLISRHLRYNPINEFEPFFESLGLKPSEYESLLPRDLIFLNDDPLLMANYHTLCNYGVPRSKMGKIFKQTPQVFKFENGVLVSKINAYEDLGISASILVNAVAVSPGILVGDVNIQFVKVVEMLKNIVGKGGDGDFDSGLIQWHFLDEVSCNWGLMLELLCLLSNAGFSEKQLAEIIHCSPCIVFEESGGKTLSMIGFLVKFGLSVNQIALLFLEFPQISMVKFFANLRVCLQLLTEIEMEAKEIGKIFQSHTILAGSNTLKTTKSLLGCLNVGKRRLCSILQDNPHEMKNWVLGIRVKPMVGLRDLEEEKSRAGKTEFLLRLGYMENTKEMDSAFKVFRGKGVELQERFDFIVNAGLTRDEVRRMIRVSPQILNQNTDRVKMKIEYLVKKGFSVSDLVSFPSYLSYKSPRVKLRLSMYNWLVDNGAVNPGLALSTIIACTDDLFLKSYVKRHPSGLQVWEELQKEICSEDS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02925 575 Gene3D Transcription termination factor 3, mitochondrial 294 567 IPR038538 -
Mepo3g02925 575 Pfam mTERF 449 548 IPR003690 GO:0003690|GO:0006355
Mepo3g02925 575 Pfam mTERF 264 427 IPR003690 GO:0003690|GO:0006355
Mepo3g02925 575 Gene3D Transcription termination factor 3, mitochondrial 79 292 IPR038538 -
Mepo3g02925 575 PANTHER CGI-12 PROTEIN-RELATED 57 225 IPR003690 GO:0003690|GO:0006355
Mepo3g02925 575 SMART mt_12 167 197 IPR003690 GO:0003690|GO:0006355
Mepo3g02925 575 SMART mt_12 467 497 IPR003690 GO:0003690|GO:0006355
Mepo3g02925 575 SMART mt_12 498 531 IPR003690 GO:0003690|GO:0006355
Mepo3g02925 575 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02925 Mepo-Chr3 39348463 39351324 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mepo3g02925 mTERF 3.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02925 - - tpra:123891547 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02925 3 39348463 39351324 Mepo3g02925 3 39348463 39351324 ECH