Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02922 ATGATTCGTAACTTCCTTTACCTGCTTCTCAATCTCGTTCTCTTCTCCTCAATTTTGATTTCTCAGAGCTCAGCGTTAACTCATTCACCCGAAGTGTGGGCACTACAGGATCTACACAGAGCGTTGAATTACTCGGAGGCACTTCGAGGATGGAACGGTAGTGATCCTTGTGAGGAGTCTTGGACGGGTGTTGCTTGTTCTGGGTCGTCGGTTATAAGCATAAACATTCAAGGGTTAGACCTCACTGGGAGTCTATGCAGGCTTTATAATCTCCGAAATTTGAAACATCTGGATGTCAGTTCTAATAACATAGTGGGCGAAATACCGTTTGGTTTACCCCCCAATGTCACACATATGAATTTAAGCCACAATTTCTTAATTGGACCCATTGGTGACGTATTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCATACAATAACTTCTCGGGAGATCTACCAAGATCATTTGGTTCCTTGACAAACCTTGCTAGACTGTTCTTGCATAGTAACAAATTCACTGGATCAGTTGCCTACCTGGCCGAACTCCCACTTACAGATTTGAACATTCAAGATAATCTGTTTAGTGGCCTTCTTCCACGTCATTTTCAGCACATAAAAAATTTATGGATTGCTAGGAATAAATTCCATGCAGTGGACAACTCTCCTCCATGGCCTGCTCCATCGGAGACATTATCCATTGAACATAATATTAGTCACCCACCCACAACTAATGCAAATGCCATCAAGAACTATGCTCCTTCGGTAGTAAGTGAGCAAAAGCCTAAGAAGAAAAAATTAGGTCCTGGAGGAATTGCTCTTATGGTTGGTGGAGGAACACTAGTGGCTGCAGGTGTGGCACTCCTTGTTGCAATCCGTTTGAACAAACTGCATCCTCAAAGCCAGAACTTGAGTTACTCAGAAAGCAAGGATATCTCTTTGCATTCTCATCCAACCAGTGCAAGCATAGAGGTCTCTTCTGCTGAACTAGACGACATGCCACTACTCCCACCTGTTAATGTTGCATCTCTTTTGGGTCCAATGAGATTTCCTTTCGTGCGCCATAGCAATGTGGAGGAAACATCAAGAAGAAGTTTTTCCAAAAGAGGCAGATCCACTGGAAGGACGAAAATTTATACCATAGCAGAGCTTCAGCTGGCTACTAACTTCTTTAATGAAGGCAACCTTCTGGGAGAGGGATCTCTTGGTCCTGTTTACAAAGCTGTATTTCCTGATGGCAAAAATTTGGCGGTGAAGATCATAAACATGGCGGGTCTGTCTTACAGAGAAGAGGAAAAGTTCATGGATGTCATTTGCACGGCTTCCAAACTGAAGCACCCCACTATCATAGCACTCAATGGTTACTGTTTTGAGCATGGAGAGCATCTTCTTGTTTACGATTACTTTGGACATTTAACTCTAAATGATGCCCTTCACAGTGGAGCATGTGAACCACTATCGTGGTTCCAACGTCTTCGGATTGCTTTAGGTGTTGCTCAGGCTCTGGATCATGGTAATGTTTTCAGCTATTTGCACTCGGCGTGCTGCCCTCCTGTTGCCCATGGTAACTTGAAGGCTGCCAATGTTCTACTGGATGAAAATTTGACGCCTCGTGTTGGTGACTGTAGCTTGGCTATTTTGAGACCATTCATGAAGAGCAATCAAGTTAAATTTCCAGCTACTGAGACTACAACTGCAGACAGAGGCTATGTTCCAGCTGACCTCAGCAGAAGGAGAGATGTATTTGCCTTTGGGGTATTGCTTCTGGAATTGTTAACAGGAAGGAAACCTTTCGATAGTGCCAGGCCAAGGGAAGAGCAAAATCTGGCGAAATGGGTTTCCCACAGGCTTCGTGATAACGTGGGCTTGGAACAGATAGTGGATCCCAATATTAAAACAACATTGTCATCCAAGGCTCTTTCTGGTTATACTGATATCATCTCCCTCTGTATGCAGCCTTCAAAACAACTCCGTCCCCCAATGTCTGAAGTTGTGAGCTCTCTTATATCTTTTGGCCAAGAGTTCAACTTTGCAAAGAGTGGTGTAGCAGATGGTGCTGATCTATTTGAGAAGTCTTCTTTCTGTTCAGCCAACACAGGCTTTGTAAATTCGCCAACATCCAGCCACCTATCAGCCTGA 2142 0.4379 MIRNFLYLLLNLVLFSSILISQSSALTHSPEVWALQDLHRALNYSEALRGWNGSDPCEESWTGVACSGSSVISINIQGLDLTGSLCRLYNLRNLKHLDVSSNNIVGEIPFGLPPNVTHMNLSHNFLIGPIGDVFTGLDNLKEMDLSYNNFSGDLPRSFGSLTNLARLFLHSNKFTGSVAYLAELPLTDLNIQDNLFSGLLPRHFQHIKNLWIARNKFHAVDNSPPWPAPSETLSIEHNISHPPTTNANAIKNYAPSVVSEQKPKKKKLGPGGIALMVGGGTLVAAGVALLVAIRLNKLHPQSQNLSYSESKDISLHSHPTSASIEVSSAELDDMPLLPPVNVASLLGPMRFPFVRHSNVEETSRRSFSKRGRSTGRTKIYTIAELQLATNFFNEGNLLGEGSLGPVYKAVFPDGKNLAVKIINMAGLSYREEEKFMDVICTASKLKHPTIIALNGYCFEHGEHLLVYDYFGHLTLNDALHSGACEPLSWFQRLRIALGVAQALDHGNVFSYLHSACCPPVAHGNLKAANVLLDENLTPRVGDCSLAILRPFMKSNQVKFPATETTTADRGYVPADLSRRRDVFAFGVLLLELLTGRKPFDSARPREEQNLAKWVSHRLRDNVGLEQIVDPNIKTTLSSKALSGYTDIISLCMQPSKQLRPPMSEVVSSLISFGQEFNFAKSGVADGADLFEKSSFCSANTGFVNSPTSSHLSA 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02922 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 116 228 - -
Mepo3g02922 713 Gene3D Transferase(Phosphotransferase) domain 1 472 686 - -
Mepo3g02922 713 SUPERFAMILY L domain-like 46 216 - -
Mepo3g02922 713 SUPERFAMILY Protein kinase-like (PK-like) 368 669 IPR011009 -
Mepo3g02922 713 ProSiteProfiles Protein kinase domain profile. 392 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02922 713 Gene3D Phosphorylase Kinase; domain 1 354 469 - -
Mepo3g02922 713 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Mepo3g02922 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 669 IPR046959 -
Mepo3g02922 713 Pfam Leucine rich repeat 114 174 IPR001611 GO:0005515
Mepo3g02922 713 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 357 469 - -
Mepo3g02922 713 Gene3D Ribonuclease Inhibitor 26 253 IPR032675 -
Mepo3g02922 713 Pfam Protein tyrosine and serine/threonine kinase 395 669 IPR001245 GO:0004672|GO:0006468
Mepo3g02922 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 470 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02922 Mepo-Chr3 39314263 39319509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02922 9 713 Strubbelig Receptor Gene Family AT5G06820 48.257 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mepo3g02922 PK_Tyr_Ser-Thr 3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02922 - - mtr:11428201 1288.86