LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g02913	ATGAATCTCCAAAGCAATAACTTCCTATCTCTTTTGGTTCCCATAGCTGCAATTTTTGCATCTTTGCATCTCATCAATCCAAATCCACAATTCCTCACCAACTTCAATTATTTGAATTTCACAACACTTTCACCGTCATCTTTATACTTGGGCAGGGACCATCATCATAGACCACACAAAAAACACCCTGACAGTGGGAGTGATGGTTCTATTTGTGATGATTTTCCACCTGGAATTCCACCTCCAAACACCAATACCACTTCTTACCTTTGTGTTGATCGAAAAGGGTGTTGTAATTTCACAACTGTACAACAAGCCGTTAATGCAGTTCCAGATTTCAGCTTGAAAAGAACCATAATATGGATTAATAGTGGCTTCTACTATGAGAAAGTTACGGTTCCCAAAACCAAACCAAACATTACATTTCAAGGACAAAGCTATACTTCAACTGCAATTGCATGGAATGATACTGCAAAGTCTGCTAATGGCACGTTTTATAGTGGCTCCGTTCAAGTTTTTGCCTCCAATTTCATTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATTCCAACTCCTGGGGCAGAAGGAGCACAAGCAGTGGCCATGAGGATATCAGGAGATCAAGCTGAATTTAGAGGTTGTGGATTCTTTGGAGCCCAAGACACTCTTCATGATGATAAGGGTCGTCATTACTTCAAAGATTGCTATATTCAAGGATCCATTGATTTTATATTTGGCAATGCAAGGTCACTCTATGAGAATTGTCAATTAGTTTCTATAGCAAATCCAGTACCTCCGGGACAAAAAAACATAAACGGTGCAGTTACAGCTCACGGTAGAGTTTCAATGGATGAAAATACAGGATATGTATTTGTGAACAGCACAATAGGAGGCAATGGTAGAATATGGTTGGGTAGGGCATGGAGACCATATTCTCGTGTTATTTTTGCATTCTCAGTTATGTCAGATATCATTGCCCCTGAAGGTTGGAATGATTTCAACGACCCTACAAGAGACCAGACTATATTTTATGGAGAGTACAATTGCTCTGGGCCAGGGGCTAATGTGAATATGAGGGTCCCTTATGTACAGAGATTGAATGATACACAAGCTTTTCCATTCCTCAACACAAGTTTTATTGATGGTGATCAATGGTTGGAAACTTAG	1170	0.3957	MNLQSNNFLSLLVPIAAIFASLHLINPNPQFLTNFNYLNFTTLSPSSLYLGRDHHHRPHKKHPDSGSDGSICDDFPPGIPPPNTNTTSYLCVDRKGCCNFTTVQQAVNAVPDFSLKRTIIWINSGFYYEKVTVPKTKPNITFQGQSYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPIPTPGAEGAQAVAMRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQLVSIANPVPPGQKNINGAVTAHGRVSMDENTGYVFVNSTIGGNGRIWLGRAWRPYSRVIFAFSVMSDIIAPEGWNDFNDPTRDQTIFYGEYNCSGPGANVNMRVPYVQRLNDTQAFPFLNTSFIDGDQWLET	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g02913	389	FunFam	Pectinesterase	84	389	-	-
	Mepo3g02913	389	ProSitePatterns	Pectinesterase signature 2.	238	247	IPR033131	-
	Mepo3g02913	389	Gene3D	-	83	389	IPR012334	-
	Mepo3g02913	389	Pfam	Pectinesterase	92	384	IPR000070	GO:0030599\|GO:0042545
	Mepo3g02913	389	MobiDBLite	consensus disorder prediction	53	77	-	-
	Mepo3g02913	389	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	78	388	-	-
	Mepo3g02913	389	SUPERFAMILY	Pectin lyase-like	89	387	IPR011050	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g02913	Mepo-Chr3	39253299	39255294	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g02913	61	388	Carbohydrate Esterase	AT1G05310	71.341	0.0	516

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g02913	-		-	gmx:100806629	682.559