Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02911 ATGGCTTCCAGTGTTGAAAAACCAAACCAAACCACTACTCAACTAGAACCACTCCCACCACCTCAACACCGTCATCATCAAATTCATCATCCACAACATAAACCACAACATCATCATCATCCAATACATGATAATCAAATTTCTTTTGGAATGATGCAATCTTCTTCATCACCCTCTGTCCTTGGAAACTACATAAATAAAGATTCGGGAGCTTATGATTTGGGTGAATTGGATCAAGCCCTTTTTCTCTATCTTAATGGACATACTGATCCATCCAGTGTCCAAGACCAAAAACAGAATTCAACATCAGGAATGAGGCCACCAACTCTCAACATTTTTCCTTCTCAGCCTATGCATGTAGAGCCATCCTCGTCCAATTCTAAGGCGAGCATGGAGTTAGTTTCTCCGCAAACAAGTGGATCCAAGAAAGGATCAGAGCCACCCAAAGCTGTTAAGCAGCGAGAGAAAAATCATGGCAAGGGTCCAACTTCAAGTTCTGAACATGAAGGACCTAAAACACCAGATCCTAAGATACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCTAGAAAAAGCAGGCTTAGGAAAAAGGCATATATTCAGCAGCTTGAGTCAAGCAGAATCAAACTTAATCAAATGGAACAGGAGCTACATCATGCTAGAAATCAAGGCATGTTCTTTGGTGGAGGTGCAATGTTGGGAGGAGAACAAAGCCTTCCTTCTATGAATAGCATTAGCTCAGAGGCTGCAATGTTTGACGTGGAATATGCGAGGTGGCTTGAGGAGCACCATCGTTTAGTTTGTGAACTAAGAGCTGCAGTTCATGAGCACATTTCTGAGAATGAGCTTAGAATGTTTGTGGACAAATTCTTGGCTCAATATGATCAAGTAGCTCATCTAAAGAGCTTAGTTGCAAAAGCAGATATATTTCATCTTGTTTCTGGCATGTGGGTTACCCCAATTGAACGTTGCTTCATGTGGATTGGTGGATTTAAGCCTTCTGAACTCATTAAGATCATTGTGAGTCAAATTGAACCACTGACCGAGCAACAAATAATGGGCATATATGGATTGCAACAATCTACACAACAGGGAGAAGATGCTCTCTCTCAAGGACTTGAGGCTCTCAATCAAACTCTTTCTGAAACTATAACATCTGATTCATTGAGCTATCCTCCCAATATGACCAACTACATGGACCAAATGGCAAGGGCCATGAACAAACTCTCCACTCTTGAAAGTTTCGTGAGAGAGGCGGATAATCTACGACACCAAACCATTCACCGTCTGAATCAGATCCTAACGACGCGTCAAGCAGCAAGGTGTTTTCTTGCCATGGCTGAGTACTTCCATCGTATGCGAGCCTTGAGTTCTTTGTGGTTGGCACGCCCTCGTCAAGAATAG 1404 0.4245 MASSVEKPNQTTTQLEPLPPPQHRHHQIHHPQHKPQHHHHPIHDNQISFGMMQSSSSPSVLGNYINKDSGAYDLGELDQALFLYLNGHTDPSSVQDQKQNSTSGMRPPTLNIFPSQPMHVEPSSSNSKASMELVSPQTSGSKKGSEPPKAVKQREKNHGKGPTSSSEHEGPKTPDPKILRRLAQNREAARKSRLRKKAYIQQLESSRIKLNQMEQELHHARNQGMFFGGGAMLGGEQSLPSMNSISSEAAMFDVEYARWLEEHHRLVCELRAAVHEHISENELRMFVDKFLAQYDQVAHLKSLVAKADIFHLVSGMWVTPIERCFMWIGGFKPSELIKIIVSQIEPLTEQQIMGIYGLQQSTQQGEDALSQGLEALNQTLSETITSDSLSYPPNMTNYMDQMARAMNKLSTLESFVREADNLRHQTIHRLNQILTTRQAARCFLAMAEYFHRMRALSSLWLARPRQE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02911 467 MobiDBLite consensus disorder prediction 90 178 - -
Mepo3g02911 467 Pfam bZIP transcription factor 177 212 IPR004827 GO:0003700|GO:0006355
Mepo3g02911 467 Gene3D - 177 225 - -
Mepo3g02911 467 MobiDBLite consensus disorder prediction 90 144 - -
Mepo3g02911 467 ProSiteProfiles DOG1 domain profile. 249 463 IPR025422 GO:0006351|GO:0043565
Mepo3g02911 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Mepo3g02911 467 SMART brlzneu 173 248 IPR004827 GO:0003700|GO:0006355
Mepo3g02911 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 217 IPR004827 GO:0003700|GO:0006355
Mepo3g02911 467 SUPERFAMILY Leucine zipper domain 178 220 IPR046347 GO:0003700|GO:0006355
Mepo3g02911 467 CDD bZIP_HBP1b-like 177 229 - -
Mepo3g02911 467 MobiDBLite consensus disorder prediction 1 43 - -
Mepo3g02911 467 Coils Coil 196 223 - -
Mepo3g02911 467 PANTHER TRANSCRIPTION FACTOR TGA9 101 466 - -
Mepo3g02911 467 MobiDBLite consensus disorder prediction 1 18 - -
Mepo3g02911 467 Pfam Seed dormancy control 267 342 IPR025422 GO:0006351|GO:0043565
Mepo3g02911 467 MobiDBLite consensus disorder prediction 24 40 - -
Mepo3g02911 467 MobiDBLite consensus disorder prediction 147 178 - -
Mepo3g02911 467 FunFam BZIP family transcription factor 176 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02911 Mepo-Chr3 39233315 39239752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02911 62 467 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 59.637 6.12e-177 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g02911 DOG1 4.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02911 K14431 - gmx:100815176 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02911 3 39233315 39239752 Mepo4g02047 4 27153750 27161428 PCT