Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02892 ATGGCTACTACTACATTCTGTATATTCCTATTCCTTCTTTCTCTAACCTTCCAAATCTTCAACTTCACTTCATCTTCATCAGAAGTTGATACCCTTCTTGCTTTCAAATCCACCATTCAAGACTCAAAAAAAGCTTTATCAACTTGGTCAAACACTTCATCAAACCACTTCTGTAACTGGACTGGAATATCTTGTTCTTCTACTACACCTTCTGATTCACTCTCAGTAACTTCTGTTAATCTTCAAAGCTTAAACCTATCTGGTGATATATCATCTTCTATATGTGACCTTCCTAATCTTTCTTATCTCAACCTTGCTAATAACATCTTTAACCAACCTATCCCACTTCATCTTTCTCAATGTAGTTCATTGAAAAGTTTGAATCTAAGTAATAATCTTATTTGGGGTACTATCCCTTCTCAGATTTCTCAGTTTGTTTCTTTGTCAGTGCTTGATTTGAGTAGAAACCATATAGAAGGAAATATTCCAGATAGTTTAGGTTCATTGAAGAATCTTGAAGTGCTTAATATGGGAAGTAACTTGCTTTCAGGTGATGTACCTAAAGTTTTTGGTAACTTGACTAAGCTAGAAGTTCTTGATTTGTCTATGAATCCTTACTTGGTGAGTGAGATTCCAGAAGATGTTGGTGAGCTTGGAAATCTAAAGCAACTTTTGTTGCAGGGTTCTTCTTTTCAAGGTGAAGTTCCCGAGTCTTTGAAGGGTTTGATTAGTTTAACTCATTTAGATCTCTCTGAAAATAATCTAACTGGTAAGGTTCCAAAGACTCTTGTAAGTTCTCTCATGAACTTGGTTTCTTTTGATGTTTCACAAAACAAGCTTTTAGGTTCATTTCCAAATGGTTTATGTAAAGGAAAAGGGCTTATAAATCTAAGTCTTCATACAAACAGATTCACTGGTTTAATACCTAACTCAACTAGTGAATGTAAGAGTCTTGAGAGATTCCAAGTTCAGAACAATGATTTCTCTGGTGATTTCCCTATTGTGTTATTTTCACTTCCTAAAATTAAGCTCATTAGAGGTGAAAACAATAGATTCACAGGACAATTACCCGAGTCAATCTCAGAAGCTGTTCAGTTAGAGCAAGTTCAGCTTGATAATAATCTTTTTGATGGTAAAATTCCTTCAGGTCTTGGCTTTGTTAAAAGCTTATACAGATTTTCTGCTTCTCTAAATCATTTCTATGGTGAACTTCCACCTAATTTTTGTGACTCACCAGTTATGAGTATAGTGAATCTCTCACACAATTCTCTTTCTGGTTCTATCCCTCAGCTGAAAAAATGTAGAAAACTAGTTTCACTTTCTTTAGCTGATAACAGTTTAACAGGAGAAATTCCTAATTCTCTTGCTGAACTACCTGTGCTCACTTACCTTGATCTTTCTGATAATAATCTCACTGGTTCAATCCCACAAAGTCTTCAAAACTTGAAACTTGCTCTTTTCAATGTGTCATTCAATCAGTTATCAGGTAAAGTACCATACTCTTTGATTTCCGGTCTTCCCGCATCCTTTTTGGAAGGAAATATTGGTCTTTGTGGTCCTGGATTGCCGAATTCATGTTCTGATGATGGAAAGCCAATACACCATACTGCTTCTGGTTTAACAACCTTAACATGTGCTCTGATCTCTCTAGCATTTGTTGCTGGAACTGTTCTTGTTGCCGGTGGATTTATATTGTATAGGAGATCTTGCAAAGGGAATGAAGATGCAGTTTGGCGTTCGGTGTTTTTCTATCCACTTAGAATTACTGAGCATGATCTTGTTATAGGGATGAATGAGAAAAGTTCAATAGGAAATGGAGATTTTGGTAATGTTTATGTTGTGAGTTTACCCAGTGGTGATTTAGTATCTGTGAAGAAGTTGGTTAAATTTGGAAACCAGTCTTCAAAGAGTTTGAAAGTTGAGGTCAAAACATTGGCTAAAATTAGGCATAAGAATGTTGCCAAGATTCTTGGGTTCTGTCATTCTGATGAGTCAGTTTTTCTCATCTATGAGTACTTGCATGGTGGAAGCTTAGGGGATTTGATTTGTAGTCAAAATTTTCAGTTGCATTGGGGAGTTAGATTAAAGATTGCCATTGGAGTTGCTCAAGGACTTGCTTATCTTCACAAGGACTATGTACCACACTTGGTTCATAGAAATCTCAAGTCAAAGAACATTCTGTTGGATGTTAACTTTGAGCCAAAATTGACACATTTTGCTCTTGATAGGATTGTTGGAGAAGCTGCATTTCAATCAACTTTGGATTCTGAAGCTGCATCTTCTTGTTACATTGCTCCAGAATATGGTTACAATAAGAAAGCAAGTGAACAATTGGATGTATACAGCTTTGGTGTTGTATTACTAGAGCTAGTTTGTGGAAGACAAGCAGATCAAAAAGATTCAAGTGACTCCTCACTTGACATAGTGAAATGGGTTAGAAGAAAAGTGAACATTACCAATGGGGTGCAACAAGTTCTTGACACTAGAATATCAAATACTTGTCACCAAGAAATGATTGGTGCTTTAGATATTGCACTACGTTGCACTTCTGTGGTACCTGAGAAAAGGCCATCAATGTTAGAGGTTGTTAGAGGTCTTCAGTCCCTTGAGTCAAGGACTTGTGTTGCAAATTTGCAGGGTGCAAATGATGAACCCTCCATTCCAGTTTGA 2670 0.3648 MATTTFCIFLFLLSLTFQIFNFTSSSSEVDTLLAFKSTIQDSKKALSTWSNTSSNHFCNWTGISCSSTTPSDSLSVTSVNLQSLNLSGDISSSICDLPNLSYLNLANNIFNQPIPLHLSQCSSLKSLNLSNNLIWGTIPSQISQFVSLSVLDLSRNHIEGNIPDSLGSLKNLEVLNMGSNLLSGDVPKVFGNLTKLEVLDLSMNPYLVSEIPEDVGELGNLKQLLLQGSSFQGEVPESLKGLISLTHLDLSENNLTGKVPKTLVSSLMNLVSFDVSQNKLLGSFPNGLCKGKGLINLSLHTNRFTGLIPNSTSECKSLERFQVQNNDFSGDFPIVLFSLPKIKLIRGENNRFTGQLPESISEAVQLEQVQLDNNLFDGKIPSGLGFVKSLYRFSASLNHFYGELPPNFCDSPVMSIVNLSHNSLSGSIPQLKKCRKLVSLSLADNSLTGEIPNSLAELPVLTYLDLSDNNLTGSIPQSLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNIGLCGPGLPNSCSDDGKPIHHTASGLTTLTCALISLAFVAGTVLVAGGFILYRRSCKGNEDAVWRSVFFYPLRITEHDLVIGMNEKSSIGNGDFGNVYVVSLPSGDLVSVKKLVKFGNQSSKSLKVEVKTLAKIRHKNVAKILGFCHSDESVFLIYEYLHGGSLGDLICSQNFQLHWGVRLKIAIGVAQGLAYLHKDYVPHLVHRNLKSKNILLDVNFEPKLTHFALDRIVGEAAFQSTLDSEAASSCYIAPEYGYNKKASEQLDVYSFGVVLLELVCGRQADQKDSSDSSLDIVKWVRRKVNITNGVQQVLDTRISNTCHQEMIGALDIALRCTSVVPEKRPSMLEVVRGLQSLESRTCVANLQGANDEPSIPV 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02892 889 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 673 874 - -
Mepo3g02892 889 SUPERFAMILY Protein kinase-like (PK-like) 600 865 IPR011009 -
Mepo3g02892 889 SMART LRR_typ_2 458 481 IPR003591 -
Mepo3g02892 889 SMART LRR_typ_2 122 145 IPR003591 -
Mepo3g02892 889 SMART LRR_typ_2 193 218 IPR003591 -
Mepo3g02892 889 SMART LRR_typ_2 97 121 IPR003591 -
Mepo3g02892 889 SMART LRR_typ_2 267 291 IPR003591 -
Mepo3g02892 889 SMART LRR_typ_2 242 266 IPR003591 -
Mepo3g02892 889 SMART LRR_typ_2 169 192 IPR003591 -
Mepo3g02892 889 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 868 - -
Mepo3g02892 889 Gene3D Phosphorylase Kinase; domain 1 591 672 - -
Mepo3g02892 889 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 588 672 - -
Mepo3g02892 889 Gene3D Ribonuclease Inhibitor 24 209 IPR032675 -
Mepo3g02892 889 Gene3D Ribonuclease Inhibitor 214 534 IPR032675 -
Mepo3g02892 889 ProSiteProfiles Leucine-rich repeat profile. 460 483 IPR001611 GO:0005515
Mepo3g02892 889 ProSiteProfiles Protein kinase domain profile. 597 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02892 889 Pfam Leucine rich repeat 147 204 IPR001611 GO:0005515
Mepo3g02892 889 Pfam Leucine rich repeat 435 494 IPR001611 GO:0005515
Mepo3g02892 889 PRINTS Leucine-rich repeat signature 245 258 - -
Mepo3g02892 889 PRINTS Leucine-rich repeat signature 458 471 - -
Mepo3g02892 889 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 266 529 - -
Mepo3g02892 889 Gene3D Transferase(Phosphotransferase) domain 1 673 883 - -
Mepo3g02892 889 SUPERFAMILY L domain-like 261 521 - -
Mepo3g02892 889 ProSitePatterns Protein kinases ATP-binding region signature. 603 626 IPR017441 GO:0005524
Mepo3g02892 889 Pfam Protein kinase domain 598 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02892 889 FunFam Leucine-rich repeat family protein 27 187 - -
Mepo3g02892 889 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Mepo3g02892 889 SUPERFAMILY L domain-like 25 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02892 Mepo-Chr3 39070986 39074027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02892 28 869 Receptor kinase-like Gene Family AT5G06940 62.175 0.0 1017
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g02892 Pkinase 7.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02892 - - gmx:100794428 1437.55