Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02890 ATGGCGCCGAGGAAGAAATCTAGGGTTTCCGATGATGAAGAAACTGAAGATCAATCTCAAAAGAGTCTCTACCAGGTTCTTGGTTTGGAGAAAACGGCCACTCAACAAGAAATAAAGAAGGCCTATTACAAATTGGCATTGCGGCTCCATCCAGATAAGAATCCTGGTGATGAGGAGGCAAAAGAGAAATTCCAGCAATTGCAAAAGGTTATTTCCATTCTTGGAGACGAAGAGAAACGGGCTCTCTATGATCAGACTGGCTGTATTGATGATGATGATCTGGCAGGAGATGTTCAGAATCTTCATGCATTTTTCAAAACAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTACAGGGGTTCTGACTCAGAGAAAAATGATTTGATTGAGCTGTACAAGAAGTACAAGGGGAATATGAACAGACTTTTTTGTTCAATGCTTTGTTCAGATGCGAAACTTGACTCACACCGATTCAAGGACATTCTTGACGAGGCTATAGCTGCTGGAGATCTAAAGGCAACAAAAGCCTATCAGAAATGGGCTAAGGAAGTATCAGAAACCAAACCACCCACAAGTCCTTTAAAGAGGAAGGCAAAGTCAAATAAGCAGTCTGAAACAGATCTGTGTGCAATCATATCACAGCGCCGAAATGAGAGGAAAGGTCAGTTTGATTCAATGTTCGCGTCTCTAGTATCAAGGTATGGTGGAAGGGATATGCCAGAACCCTCCGAAGAGGAATTTGAAGCTGCACAGAAAAAGCTGGAAAAGGGAAGATCCTCAAAAAAATCAAAGCAATCAAAGCGAAAGTAA 828 0.4167 MAPRKKSRVSDDEETEDQSQKSLYQVLGLEKTATQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCIDDDDLAGDVQNLHAFFKTMYKKVTEADIEEFEANYRGSDSEKNDLIELYKKYKGNMNRLFCSMLCSDAKLDSHRFKDILDEAIAAGDLKATKAYQKWAKEVSETKPPTSPLKRKAKSNKQSETDLCAIISQRRNERKGQFDSMFASLVSRYGGRDMPEPSEEEFEAAQKKLEKGRSSKKSKQSKRK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02890 275 MobiDBLite consensus disorder prediction 188 213 - -
Mepo3g02890 275 MobiDBLite consensus disorder prediction 240 275 - -
Mepo3g02890 275 MobiDBLite consensus disorder prediction 244 262 - -
Mepo3g02890 275 SUPERFAMILY Chaperone J-domain 20 91 IPR036869 -
Mepo3g02890 275 Pfam DnaJ domain 23 84 IPR001623 -
Mepo3g02890 275 Gene3D DnaJ domain 6 100 IPR036869 -
Mepo3g02890 275 SMART dnaj_3 21 79 IPR001623 -
Mepo3g02890 275 PRINTS DnaJ domain signature 79 98 IPR001623 -
Mepo3g02890 275 PRINTS DnaJ domain signature 42 57 IPR001623 -
Mepo3g02890 275 PRINTS DnaJ domain signature 59 79 IPR001623 -
Mepo3g02890 275 PRINTS DnaJ domain signature 24 42 IPR001623 -
Mepo3g02890 275 MobiDBLite consensus disorder prediction 1 19 - -
Mepo3g02890 275 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 12 271 IPR042977 -
Mepo3g02890 275 MobiDBLite consensus disorder prediction 1 21 - -
Mepo3g02890 275 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
Mepo3g02890 275 CDD DnaJ 24 76 IPR001623 -
Mepo3g02890 275 MobiDBLite consensus disorder prediction 195 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02890 Mepo-Chr3 39044483 39048959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02890 24 84 C2H2 Transcription Factor Family AT1G74250 39.394 5.81e-08 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02890 3 39044483 39048959 Mepo3g02890 3 39044483 39048959 ECH
Mepo3g02890 3 39044483 39048959 Mepo4g02003 4 26191843 26196075 PCT