Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02889 ATGGAGATAGAGAATAGTGTGATGAAGTCAAAGAAGATGGAAGAGTATGAAGTGATTGAACAAATTGGTAGAGGAGCATTTGGTTCTGCTTTTCTTGTTCTTCATAAGTCTGAGAAAAAGAGGTATGTGTTGAAAAAGATTCGGTTGGCTAAGCAGACAGAGAAGTTCAAAAGAACAGCACACCAAGAGATGAATCTGATTGCAAAACTGAATAACCCATATATTGTGGATTACAGAGATGCTTGGGTGGAGAAGGAGGATCATGTATGCATTATAACTGGCTATTGTGAAGGAGGTGACATGGCTGATAGTATTAAGAAAGCTCGAGGATCATTTTTCCCTGAGGAGAAGGTTTGCAAATGGCTAACTCAGTTGTTGATAGCTGTCGACTACTTGCACTCTAACCGTGTAATCCACAGGGATCTTAAGTGCTCCAACATATTCCTCACCAAGGACAACAATATTCGGCTCGGTGATTTTGGTCTTGCAAAGCGACTTAATGGAGAAGACCTCACTTCCTCGGTAGTTGGAACTCCAAATTACATGTGTCCTGAGCTCCTCGCAGACATACCATATGGTTATAAATCTGATATATGGTCTCTTGGTTGCTGCATGTTTGAGATTGCTGCTCATCAACCAGCATTTCGTGCTCCGGACATGGCTGGACTTATCAATAAAATAAACAGATCCTCCATTTCTCCGCTGCCAATTGTTTATTCTTCTACACTGAAACAAATTATCAAGAGCATGCTGAGGAAAAGTCCAGAACATAGACCAACAGCTGCCGAATTGCTAAGACATCCACATTTACAACCTTACGTTCTTCGCTGTCAGAATGCATCATCTAATGTTCTTCCAATATATCCCCTAGTTAACTTAAAGGATAAAACAAAAAGATCTCCCAAATCTAGTGGTGGCAAGTGCCATTACGACAGAGAAATGGGATTTGTAAATCGTTTGGAACGGGTTCATCCAATTGAGGGAAATGGTGATGTACAAACAAGCAATCTTCGTAACAATGGTGAGGTAACAATCTCAACCAGCACAGAAGACAATCTTGAGACCAAGATGGTTTATCTTACGAGCTACATAGCCGAATCTTCTACTAGTATTAGCGGCTCGAAAGATGGGTCAACAACATCCGAATCAACCACTTGCAGTGTGTGCAAGGAGGACTATAAAACTAGACCAGCAAGGGAAATAGCTAGCACCGGGATCACCTCAAAGAGCATACAAGATTCTCTGCATGAAAAAGAACAAAGATTTGATGTAGAGACCACCAAAGTTGAAGATACCTTCTCGAGCAAAGGCTTTGATAATGCTGAAACACACAGGGAAGATGCCAAACTTGATGACCTCAGGAAATCTACTACTTCCAGTGCGAGCAATAGCAGCACCGAAAAAAACAATTCCGCTGATGAGGAAAGTTCATCGCTAATTATGCATCCTCTCAGGGTTGAACATGGCACTAAATCTGTAGACAACTTGAAAAAAAATGAAAACCCTGATGCCTTTACGGAAGAAGGCTCACATATGAACGACCTGTTGTGTGAGAGTAATGATAATCATAATACTGATAGACTTGCAGTTAAGGATGATGACATAGCAAAACAACAGGTTATTTGCTCCACACAGAAAGATGGCAATGTAACACCAAATAGCATTTCATTGAGTATAGTTACCGCAACAGATTGTTCTGGTGATGGTGACGAAACGACCAATAATGAGTTGGATAGTCCGTGCCATCAAAGAGCTGATGCATTGGAATCTCTGCTTGAGTTATGTGCCCAGTTACTTAAACAAGATAAACTTGAAGAGCTTGCTGGTGTGCTGAGACCATTTGGAAAAGAAGCTGTATCATCAAGAGAAACGGCAATATGGTTGACAAAGAGCCTTATATCTGCTCAAAAGTTTAACCCTGAAACCTAG 1929 0.4095 MEIENSVMKSKKMEEYEVIEQIGRGAFGSAFLVLHKSEKKRYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVDYRDAWVEKEDHVCIITGYCEGGDMADSIKKARGSFFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNNIRLGDFGLAKRLNGEDLTSSVVGTPNYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSSTLKQIIKSMLRKSPEHRPTAAELLRHPHLQPYVLRCQNASSNVLPIYPLVNLKDKTKRSPKSSGGKCHYDREMGFVNRLERVHPIEGNGDVQTSNLRNNGEVTISTSTEDNLETKMVYLTSYIAESSTSISGSKDGSTTSESTTCSVCKEDYKTRPAREIASTGITSKSIQDSLHEKEQRFDVETTKVEDTFSSKGFDNAETHREDAKLDDLRKSTTSSASNSSTEKNNSADEESSSLIMHPLRVEHGTKSVDNLKKNENPDAFTEEGSHMNDLLCESNDNHNTDRLAVKDDDIAKQQVICSTQKDGNVTPNSISLSIVTATDCSGDGDETTNNELDSPCHQRADALESLLELCAQLLKQDKLEELAGVLRPFGKEAVSSRETAIWLTKSLISAQKFNPET 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02889 642 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Mepo3g02889 642 MobiDBLite consensus disorder prediction 435 508 - -
Mepo3g02889 642 FunFam Serine/threonine-protein kinase Nek6 1 95 - -
Mepo3g02889 642 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02889 642 CDD STKc_Nek 16 270 - -
Mepo3g02889 642 Gene3D Transferase(Phosphotransferase) domain 1 96 284 - -
Mepo3g02889 642 MobiDBLite consensus disorder prediction 455 477 - -
Mepo3g02889 642 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02889 642 MobiDBLite consensus disorder prediction 400 423 - -
Mepo3g02889 642 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02889 642 MobiDBLite consensus disorder prediction 487 507 - -
Mepo3g02889 642 MobiDBLite consensus disorder prediction 435 454 - -
Mepo3g02889 642 SUPERFAMILY Protein kinase-like (PK-like) 13 302 IPR011009 -
Mepo3g02889 642 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 13 591 - -
Mepo3g02889 642 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Mepo3g02889 642 FunFam serine/threonine-protein kinase Nek6 isoform X2 96 284 - -
Mepo3g02889 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02889 Mepo-Chr3 39036822 39042810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02889 9 271 MAP Kinase Kinase Kinase AT3G13530 33.585 1.89e-38 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mepo3g02889 Pkinase 4.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02889 K08857 - gmx:100793379 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02889 3 39036822 39042810 Mepo3g02889 3 39036822 39042810 ECH
Mepo3g02889 3 39036822 39042810 Mepo4g01997 4 26157205 26165331 PCT