Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02877 ATGTGCTGTGAGTTGGAGGGTTTAAAACCTGCGCCGTCTCCGTCTCCGTCTCTATCTCCAACTTTGACAAACAATTCTCAACCGAGAAACCACACTATGAATCACTTAACTATCGGTACTGAAGATTCTTTTGCGAGCCTTCTTGAGCTTGCTGCTAATGACGATGTTGAAGGGTTCAAACGATTGATTGAGTGTGATCCTACGTCAGTGGATGAGGTTGGATTATGGTATGGTCGTCGCAAGGGTTCGAAGCAGATGGTCAATGAGCAAAGGACACCCTTGATGGTTGCTGCTACATATGGTAGCATTGATGTTATGAAATTGATTATTTCTTTATCGGATGTTGATATCAACAGGCCTTGTGGCCTTGACAAGAGCACCGCTCTTCACTGTGCTGCTTCTGGTGGGGCTGAAAATGCTGTCGATGCTGTGAAGCTGCTTCTTGCAGCAGGGGCTGATCCTAATTCTTTGGATGCTAATGGGGATCGTCCGTTAGATGTTATTGTTTATTCCCCGAAGCTTGAACTTGTGAAAAACAGTCTTGAGGAGCTACTTCAAATTGATGGTCCTAGTGCTGGATGTAATCTTAGGGTGATTACAAACTCACTTAATTCTTATTCTCCTCCTTTGTCGGCTTCACCTGAGAACGGGTCTCCTTCTCCACCACCGGATCTCCTGTTGAAGTTAAAGTCAATTGATGTCCCTCTTTCTCCTGCTGGATCTGAGAAGAAAGAATATCCTGTTGATCCATCCCTTCCTGACATCAAAAACAGCATATACTCAACTGATGAATTCCGAATGTATTCTTTCAAGGTTCGACCTTGTTCGCGTGCTTATTCCCATGATTGGACTGAATGCCCTTTTGTTCATCCAGGGGAGAATGCCCGGAGAAGGGACCCGAGAAAGTATCATTACAGCTGTGTCCCTTGTCCTGATTTTCGCAAGGGTGCTTGCCGGCGCGGGGACATGTGTGAATATGCTCATGGGGTTTTCGAGTGCTGGCTGCATCCTGCACAATATAGAACCCGTCTCTGCAAGGACGGGACAAATTGCTCCAGGAGAGTTTGCTTCTTTGCCCACACTCCTGAAGAGCTTCGGCCATTGTATGTTTCAACTGGTTCTGCGGTTCCCTCACCTCGGTCAAGCACGTCTTCTGCCATGGATTTTGCTGCAGCCATGAGCATGTTGCCTGGCTCTCCTTCGTCGATGTCTGTCATGTCTCCTTCACCATTCACTCCACCCATGTCACCTTCTGGCAATGGCATTTCACACAACTCTGTTGCTTGGCCACAGCCAAACATCCCAGCGTTGCATCTTCCTGGAAGTAATCTTCAGTCAAGTCGTTTGAGATCTTCTCTCAATGCTAGAGATATTCATATGGATGATTTTGAGTTGTTATCTGATTATGATCAACAGCAACAACTCCTTAATGAGTTGGCATGCCTGTCTCCACGTCATATTAATTCTAACAGTCTTAGCCGCTCCGGTCGAATGAAGCCATTGAATCCATCAAATCTTGATGATCTCTTTTCTGCTGAGAGTTCTTCTCCCCGATATGCTGATCCAAATCTGACTTCAACCGTTTTTTCTCCGACTCACAAATCAGCTGTCTTTAATCAGTTTCAGCAGCAGCAGAACATGTTGTCACCAGTGAATACAAATTTTTCTTCTAAAAATGTTGATCATCATTTATTGCAGGCAGCTTCTTATGGTGTTCAGCCATCAGGAAGAATGTCTCCACGAAACGTGGAACCTATCTCTCCGATGGGCTCAAGGATGTCAATGCTGGCACAACGCGACAAGCAGCAACAATTTCGTAGCCTAAGCTTCCGTGAGCACGGCTCTAACTCCATGCTTGCAGCTGCTGGCTCAGTCAATAATTCTTGGTCAAAATGGGAATCCCCCAATGGTAAGTTGGATTGGGCTCATAATGCGGATGAAGTTGGTAAGCTCCGTAGATCATCTTCATTTGAGCTTGGGAACAACGGCGAGGAGCCTGATTTATCATGGGTGCAGTCACTTGTCAAAGAATCTCCAACTGAGATTAAAGAGAAATTGGCAACTTCCATCTCAGGTGCCGCACCAGCTGGATCCTCGGGTGAGGGAATGAATATGAGTGCACAAATGGAGTCTGTTGATCATGCTGTATTGGGAACATGGCTTGAACAGATGCAGCTTGATCATCTTGTGGCTCAGCAAAACTGA 2205 0.4594 MCCELEGLKPAPSPSPSLSPTLTNNSQPRNHTMNHLTIGTEDSFASLLELAANDDVEGFKRLIECDPTSVDEVGLWYGRRKGSKQMVNEQRTPLMVAATYGSIDVMKLIISLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGADPNSLDANGDRPLDVIVYSPKLELVKNSLEELLQIDGPSAGCNLRVITNSLNSYSPPLSASPENGSPSPPPDLLLKLKSIDVPLSPAGSEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTPEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMSMLPGSPSSMSVMSPSPFTPPMSPSGNGISHNSVAWPQPNIPALHLPGSNLQSSRLRSSLNARDIHMDDFELLSDYDQQQQLLNELACLSPRHINSNSLSRSGRMKPLNPSNLDDLFSAESSSPRYADPNLTSTVFSPTHKSAVFNQFQQQQNMLSPVNTNFSSKNVDHHLLQAASYGVQPSGRMSPRNVEPISPMGSRMSMLAQRDKQQQFRSLSFREHGSNSMLAAAGSVNNSWSKWESPNGKLDWAHNADEVGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKLATSISGAAPAGSSGEGMNMSAQMESVDHAVLGTWLEQMQLDHLVAQQN 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02877 734 Gene3D - 305 367 - -
Mepo3g02877 734 PANTHER UNKEMPT FAMILY MEMBER 49 678 IPR045234 -
Mepo3g02877 734 ProSiteProfiles Ankyrin repeat profile. 124 159 IPR002110 GO:0005515
Mepo3g02877 734 Gene3D - 17 211 IPR036770 -
Mepo3g02877 734 SUPERFAMILY Ankyrin repeat 47 182 IPR036770 -
Mepo3g02877 734 SMART c3hfinal6 304 330 IPR000571 GO:0046872
Mepo3g02877 734 SMART c3hfinal6 339 362 IPR000571 GO:0046872
Mepo3g02877 734 SMART ANK_2a 89 119 IPR002110 GO:0005515
Mepo3g02877 734 SMART ANK_2a 124 156 IPR002110 GO:0005515
Mepo3g02877 734 FunFam Zinc finger CCCH domain-containing protein 66 262 330 - -
Mepo3g02877 734 Pfam Ankyrin repeats (3 copies) 51 156 IPR002110 GO:0005515
Mepo3g02877 734 MobiDBLite consensus disorder prediction 1 31 - -
Mepo3g02877 734 ProSiteProfiles Ankyrin repeat region circular profile. 124 158 - -
Mepo3g02877 734 ProSiteProfiles Zinc finger C3H1-type profile. 309 331 IPR000571 GO:0046872
Mepo3g02877 734 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 309 329 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02877 Mepo-Chr3 38880555 38884282 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02877 41 727 C2H2 Transcription Factor Family AT5G12850 53.748 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo3g02877 Ank_2 6.7e-10 CL0465