Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02861 ATGGAAATTCTGTGTTTGTTGTATATTGTGTTAGGTTGGTATCTTTCAAATGTTGAGTTTGTAGGTGCTGAGTTACAGGACCAAGCTATACTACATGCCATAAATCAAGAGCTTAAAGTTCCTGAATGGAGTGATGCAAACATTTCAGATTACTGCACTTGGCAAGGGGTAAGCTGTGGAAACCATTCAATGGTTGAGAAGCTTAATCTTGCTCACAAGAATCTTAGAGGTAATGTGACTTTAATGTCTGAACTCAAAAGTTTGAAGTTACTTGACCTTTCAAATAATAACTTTGGTGGATTGATTCCTTCTGAGTTTGGTACTTTATCTGAGCTTGAAGTACTAGATTTGTCTTCTAATAAGTTTGAAGGTTCAATTCCATCACAGTTTGGTGGTCTCAGAAGCTTAAAATCATTAAACCTTTCCAATAATTTGCTTGTTGGTGAGTTACCAATTGAACTTCATGGTCTAAAGAAATTGCAGGAGTTGCAACTTTCTAGTAATCAATTGAGTGGTTTTATACCTTCTTGGGTGGGGAATTTGACCAACTTGAGAGTTTTTTCGGCTTATGAGAATCGTTTAGATGGTAGGATTCCTGATAATCTAGGCTTGATTCCTGGGCTTCAAATACTTAACCTGCATTCTAACCAGCTTGAAGGTTCAATACCATCAAGCATTTTCACTTCGGGGAAACTAGAAGTTCTGGTTCTCACTCAGAATAATTTTAGTGGTGATCTTCCTGAGGAAATTGGTAACTGTCATGCCCTTTCAAACATTAGAATTGGAAACAACCATCTAGTAGGTAACATTCCTAAAACCATTGGAAATCTTAGTAGCCTAACATACTTTGAAGCTGATAATAATAATCTTTCTGGTGAACTAGTTTCGGAATTTGCTCAGTGTTCTAATCTCACCCTCTTGAATTTAGCTTCAAATGGATTTTCTGGGACGATTCCACAAGAGTTTGGACAACTTATGAACCTTCAGGAATTAATTTTGTCTGGAAATAGCCTATTTGGTGATATTCCAAAACCAATTCTCAGTTGCAAAAGTCTCAACAAGCTTGATATTAGCAACAACAGATTGAATGGGACGATACCAAATGAAATCTGCAATATTTCTCGATTGCAGTACTTGCAATTGAATCTGAATTCCATAAGAGGAGAGATCCCTCATGAAATTGGAAATTGCGCCAAACTTCTTGAATTACAGTTGGGGAGTAACTATTTAACTGGAGCTATTCCTCCTGAGATCAGTCACATCAGGAACTTACAGATAGCTTTAAATTTGAGCTTCAATCATCTTCACGGACCATTGCCACCAGAATTGGGAAAACTAGACAAACTTGTTTCTCTCGATCTTTCGAACAATCGGCTATCAGGTAATATCCCAACTGAACTTAAGGGAATGTTAAGCTTGATAGAGGTGAATTTCTCAAATAATCTATTTGGAGGCCCTGTACCAACATTTGTACCGTTCCAGAAGAGTCCTAGTTCAAGTTTTTTAGGCAATAAAGGGCTTTGTGGAGAGCCCTTGAACTTTTCATGTGGAGGCATTTATGATGATCACAATAGTGACCATCACAAGGTTTCTTACAGAATCGTACTGGCAGTAATTGGTTCCGGTTTGACAGTTTTTATTTCGGTAATTGTAGTTGTCATGTTGTTTATGATCAGAGAGAGACAAGAAAAAGCAGCCAAAGAGGCTGCTGGTATTGTTGATGATCCAACCAATGACAAACCAACTATAATTGCAGGGACTGTTTTTGTCGATAATCTACAACAAGCAGTAGACCTTGATGCTGTTGTTAATGCGACGCTGAAAGACTCGAATAAGCTCAGCAGTGGAACTTTCAGCTCAGTTTACAAGGCAACCATGCCTTCTGGTGTGGTCTTATCGGTTAGGAGACTGAAATCTGTGGACAAGACAATAATCCACCATCAGAACAAGATGATAAGAGAACTCGAAAGGCTAAGCAAAGTTTGTCATGAAAATCTTGTGCGACCTATTGGCTATGTCATTTATGAAGATGTTGCTCTTCTGTTGCATAATTATTTTCCCAATGGAACATTGTATCAGCTTCTTCATGAATCAACAAGGCAACCTGAATATAAGCCTGATTGGCCTGCTAGGCTATCCATTGCCATCGGTGTGGCAGAAGGCTTGGCTTTCCTTCATCATGTCGCAATTATCCATCTCGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAACTTCAAGCCATTGGTTGGAGAGATTGAGATTTCGAAACTTCTCGATCCAACCAGAGGTACTGGAAGTATAAGTGCAGTTGCCGGCTCCTTTGGTTACATACCACCAGAATATGCATACACCATGCAAGTGACAGCACCAGGAAATGTTTACAGCTATGGTGTTGTTCTGTTGGAAATCCTTACAACTCGACTTCCTGTTGAAGAAGATTTTGGTGAAGGCGTAGATTTGGTTAAGTGGGTTCATAGTGCTCCTGTAAGAGGGGAAACTCCAGAGCAGATACTTGATGCAAAGCTTAGTACAGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTAAAGGTTGCCTTGCTTTGCACTGATAGCACACCAGCCAAACGACCAAAAATGAAGAATGTAGTAGAAATGCTTCGCGAGATCAAGTAA 2661 0.3927 MEILCLLYIVLGWYLSNVEFVGAELQDQAILHAINQELKVPEWSDANISDYCTWQGVSCGNHSMVEKLNLAHKNLRGNVTLMSELKSLKLLDLSNNNFGGLIPSEFGTLSELEVLDLSSNKFEGSIPSQFGGLRSLKSLNLSNNLLVGELPIELHGLKKLQELQLSSNQLSGFIPSWVGNLTNLRVFSAYENRLDGRIPDNLGLIPGLQILNLHSNQLEGSIPSSIFTSGKLEVLVLTQNNFSGDLPEEIGNCHALSNIRIGNNHLVGNIPKTIGNLSSLTYFEADNNNLSGELVSEFAQCSNLTLLNLASNGFSGTIPQEFGQLMNLQELILSGNSLFGDIPKPILSCKSLNKLDISNNRLNGTIPNEICNISRLQYLQLNLNSIRGEIPHEIGNCAKLLELQLGSNYLTGAIPPEISHIRNLQIALNLSFNHLHGPLPPELGKLDKLVSLDLSNNRLSGNIPTELKGMLSLIEVNFSNNLFGGPVPTFVPFQKSPSSSFLGNKGLCGEPLNFSCGGIYDDHNSDHHKVSYRIVLAVIGSGLTVFISVIVVVMLFMIRERQEKAAKEAAGIVDDPTNDKPTIIAGTVFVDNLQQAVDLDAVVNATLKDSNKLSSGTFSSVYKATMPSGVVLSVRRLKSVDKTIIHHQNKMIRELERLSKVCHENLVRPIGYVIYEDVALLLHNYFPNGTLYQLLHESTRQPEYKPDWPARLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLVGEIEISKLLDPTRGTGSISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVEEDFGEGVDLVKWVHSAPVRGETPEQILDAKLSTVSFGWRKEMLAALKVALLCTDSTPAKRPKMKNVVEMLREIK 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02861 886 PRINTS Leucine-rich repeat signature 446 459 - -
Mepo3g02861 886 PRINTS Leucine-rich repeat signature 352 365 - -
Mepo3g02861 886 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 686 886 - -
Mepo3g02861 886 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 228 519 - -
Mepo3g02861 886 SMART LRR_typ_2 205 229 IPR003591 -
Mepo3g02861 886 SMART LRR_typ_2 373 397 IPR003591 -
Mepo3g02861 886 SMART LRR_typ_2 325 349 IPR003591 -
Mepo3g02861 886 SMART LRR_typ_2 85 108 IPR003591 -
Mepo3g02861 886 SMART LRR_typ_2 109 132 IPR003591 -
Mepo3g02861 886 SMART LRR_typ_2 446 469 IPR003591 -
Mepo3g02861 886 SMART LRR_typ_2 157 181 IPR003591 -
Mepo3g02861 886 SMART LRR_typ_2 133 156 IPR003591 -
Mepo3g02861 886 Gene3D Ribonuclease Inhibitor 174 273 IPR032675 -
Mepo3g02861 886 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Mepo3g02861 886 Gene3D Transferase(Phosphotransferase) domain 1 686 886 - -
Mepo3g02861 886 ProSiteProfiles Protein kinase domain profile. 607 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02861 886 Gene3D Ribonuclease Inhibitor 276 515 IPR032675 -
Mepo3g02861 886 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 55 227 - -
Mepo3g02861 886 SUPERFAMILY L domain-like 252 512 - -
Mepo3g02861 886 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 256 883 - -
Mepo3g02861 886 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 577 685 - -
Mepo3g02861 886 Pfam Protein tyrosine and serine/threonine kinase 610 882 IPR001245 GO:0004672|GO:0006468
Mepo3g02861 886 Gene3D Ribonuclease Inhibitor 25 173 IPR032675 -
Mepo3g02861 886 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Mepo3g02861 886 SUPERFAMILY Protein kinase-like (PK-like) 606 882 IPR011009 -
Mepo3g02861 886 Gene3D Phosphorylase Kinase; domain 1 578 685 - -
Mepo3g02861 886 SUPERFAMILY L domain-like 33 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02861 Mepo-Chr3 38717851 38721575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02861 1 886 Receptor kinase-like Gene Family AT2G41820 71.509 0.0 1277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g02861 PK_Tyr_Ser-Thr 9.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02861 - - adu:107492611 1504.58