Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02845 ATGGCTTCGTCTTCCTCCGATCCAGGCAAGTCTGCGGAGACATCAGAAGCAGTGGCGGCGGCGAATGATCAGCTTTTACTGTACAGAGGATTGAAAAAAGCGAAGAAAGAGAGAGGTTGTACTGCTAAAGAACGAATCAGTAAAATGCCTCCTTGTGCCGCTGGTAAACGTAGCTCCATCTACCGCGGTGTCACCAGGCATAGATGGACCGGTCGTTATGAAGCGCATCTGTGGGATAAAAGTACATGGAATCAAAATCAGAATAAGAAAGGAAAACAAGTTTACTTGGGGGCGTATGATGACGAGGAAGCAGCGGCTAGAGCGTATGACCTTGCTGCTCTGAAATACTGGGGTCCTGGGACTCTCATTAACTTCCCAGTGACTGATTATACAAGAGATCTCGAAGAAATGCAGAACGTTTCGAGAGAAGAATACCTTGCGTCTTTGCGGAGGAAGAGCAGTGGTTTTTCAAGAGGACTATCAAAATATCGTGGACTCTCCAGTCGATGGGGGCCATCATATGGTCGAATGGCTGGATCTGATTACTTCAGTAGTATACATTATGGTATAGGGGATAATTCAGCTGCGGAAAGTGAATATGTTAGTGGTTTCTGCGTAGAAAGAAAGATTGATTTAACAAATCACATCAAATGGTGGGGATCTAATAAGAATCGACAACCTGATGCTGGAACAAGATTATCAGAAGAAAAGAAACATGGTTTTGCTGGAGATATTTACTGTGAACTTAAAACATTGGAACAGAAAGTCCAACCGACAGAACCATACAAGATGCCAGAGTTAGGACCGCTGCACAATGAGAAAAAACATAAAAGTTCTTCAATCTCTGCCTTAAGTATTTTGTCACAGTCTGCTGCTTACAAGAGCATGCAAGAGAAAGCGGCAAAAAGACAGGAAAATAGCACTGATAATGACGAGAATGAAAACAAAAATATAGTCAATGAGTTGGATCGTGGGAAGGCAGTAGAGAAACCCTCAAATCATGATGGCAGCAATGATCGACTTGACATTGCAATGGGAATGAGTGGGGCGTTGTCTCTTCAAAGAAATGTTTATCCATTGACATCATTCTTGTCTGCACCACTTTTGACAGCCTACAACACTGTTGATCCAATGGTAGATCCTGCTCTCTGGACATCTCTCATTCCCATGCTTCCTGCTGGCCTTCCTCGTACATCTGAGGTTACAAAGACGGAGCCCGATTCAACTTACACTATGTTTCAGCCACAGGAGTGA 1254 0.437 MASSSSDPGKSAETSEAVAAANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWGPSYGRMAGSDYFSSIHYGIGDNSAAESEYVSGFCVERKIDLTNHIKWWGSNKNRQPDAGTRLSEEKKHGFAGDIYCELKTLEQKVQPTEPYKMPELGPLHNEKKHKSSSISALSILSQSAAYKSMQEKAAKRQENSTDNDENENKNIVNELDRGKAVEKPSNHDGSNDRLDIAMGMSGALSLQRNVYPLTSFLSAPLLTAYNTVDPMVDPALWTSLIPMLPAGLPRTSEVTKTEPDSTYTMFQPQE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02845 417 ProSiteProfiles AP2/ERF domain profile. 60 126 IPR001471 GO:0003700|GO:0006355
Mepo3g02845 417 SMART rav1_2 60 132 IPR001471 GO:0003700|GO:0006355
Mepo3g02845 417 PRINTS Ethylene responsive element binding protein signature 108 128 IPR001471 GO:0003700|GO:0006355
Mepo3g02845 417 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mepo3g02845 417 FunFam AP2-like ethylene-responsive transcription factor 59 128 - -
Mepo3g02845 417 SUPERFAMILY DNA-binding domain 59 127 IPR016177 GO:0003677
Mepo3g02845 417 Pfam AP2 domain 60 118 IPR001471 GO:0003700|GO:0006355
Mepo3g02845 417 MobiDBLite consensus disorder prediction 257 281 - -
Mepo3g02845 417 MobiDBLite consensus disorder prediction 401 417 - -
Mepo3g02845 417 MobiDBLite consensus disorder prediction 298 337 - -
Mepo3g02845 417 Gene3D AP2/ERF domain 60 128 IPR036955 GO:0003700|GO:0006355
Mepo3g02845 417 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 303 - -
Mepo3g02845 417 MobiDBLite consensus disorder prediction 398 417 - -
Mepo3g02845 417 MobiDBLite consensus disorder prediction 295 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02845 Mepo-Chr3 38537588 38541876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02845 18 409 AP2-EREBP Transcription Factor Family AT2G41710 65.174 8.57e-174 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g02845 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02845 K09285 - gmx:100814117 714.531