Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02843 ATGGAAGGAGTAGTTATTAGTGAGAAGGGATTGTTGGAATGTGGAAGAAAGTGCACTCCATCACCCTTCTTGTTGAAGACATACATGTTGGTCGAGGATCCAATAACCGATGATGTGATATCGTGGAACGATGAAGGAACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCTCGTGATATCCTTCCAACACTCTTCAAGCATAGCAACTTCTCTAGCTTTGTACGGCAGCTCAATACCTATGGATTTCGTAAAGTTGCAACAAGTAGATGGGAGTTTTGCAATGAAAGATTCAAGAAAGGTGAAAGAGAGTTACTATCCGAGATTCGGAGAAGAAAAGCTTGGAGCAACAAGCAACAACAAACGGTACAAAACCAAGATTCTGATGAAGATCAAAGATCATCATCAACCTCATCAACTTCGGGTTACACTAATCTAGTGGATGAAAACAAGCGACTCAAAGAGGAAAATGTGGTGTTGAATTCTGAGCTAACAAGCATGAAAAGGAAGTGTAAGGAACTACTTGATTTGGTTTCAATTTATACCAAAAAAATGGAAGAAGAGGAAGCTAAAGATGATGATAAAAGGCCAATGCTGTTTGGGGTGAGATTGGATGTTCAACAAGGAGAAAGAAGGATTAAAAGGACTAGAGCTGAGATTAGTGAAAACGCAAGGATTTTGTTGTCTCAATCATGCAAATAG 702 0.406 MEGVVISEKGLLECGRKCTPSPFLLKTYMLVEDPITDDVISWNDEGTAFVVWQPAEFARDILPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNERFKKGERELLSEIRRRKAWSNKQQQTVQNQDSDEDQRSSSTSSTSGYTNLVDENKRLKEENVVLNSELTSMKRKCKELLDLVSIYTKKMEEEEAKDDDKRPMLFGVRLDVQQGERRIKRTRAEISENARILLSQSCK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02843 233 Gene3D - 15 114 IPR036388 -
Mepo3g02843 233 MobiDBLite consensus disorder prediction 116 147 - -
Mepo3g02843 233 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g02843 233 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 20 186 IPR027725 -
Mepo3g02843 233 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g02843 233 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g02843 233 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g02843 233 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g02843 233 SUPERFAMILY "Winged helix" DNA-binding domain 20 112 IPR036390 -
Mepo3g02843 233 FunFam Heat stress transcription factor B-4 15 113 - -
Mepo3g02843 233 Coils Coil 143 191 - -
Mepo3g02843 233 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02843 Mepo-Chr3 38498301 38501039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02843 20 181 HSF AT2G41690 61.111 4.92e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo3g02843 HSF_DNA-bind 1.4e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02843 K09419 - gmx:100802739 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02843 3 38498301 38501039 Mepo3g02843 3 38498301 38501039 ECH